Microbe sample from Halopseudomonas sabulinigri - BioSample - NCBI

Warning: The NCBI web site requires JavaScript to function. more...

Result Filters

Microbe sample from Halopseudomonas sabulinigri

Identifiers: BioSample: SAMN09638568; Sample name: Uncultivated Pseudomonas sabulinigri HyVt-376 genome recovered from SRR1555744; SRA: SRS3740656

Organism: Halopseudomonas sabulinigri
cellular organisms; Bacteria; Pseudomonadota; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Halopseudomonas

Package: Microbe; version 1.0

Attributes

isolate	HyVt-376
isolation source	LokiAmp MDA-amplified sample from Loki's castle hydrothermal vent sediment
collection date	2010
geographic location	Arctic Ocean: Gakkel Ridge
sample type	metagenomic assembly
latitude and longitude	73.763167 N 8.464000 E
subsource note	Metagenome-assembled genome binned from sequencing reads available in SRR1555744
metagenome source	marine sediment metagenome
assembly_method_and_version	MEGAHIT v1.1.2
completeness_estimated	98.89
contamination_estimated	0.95
quality_assessment_method_and_version	CheckM v1.0.7
environmental-sample	true
genome_coverage	38.66
mapping_method_and_version	Bowtie 2 v2.2.8
metagenomic	true

BioProject: PRJNA480137 metagenomes
Retrieve all samples from this project

Submission: The University of Hong Kong, Zhichao Zhou; 2018-07-11

Accession:: SAMN09638568
ID:: 9638568

BioProject SRA Nucleotide

Supplemental Content

Related information

BioProject
BioProject links
SRA
Links to SRA experiments
Nucleotide
Nucleotide links
Assembly
Assembly
Taxonomy
Links to Taxonomy

Recent activity

Clear Turn Off Turn On

Microbe sample from Halopseudomonas sabulinigri
Microbe sample from Halopseudomonas sabulinigri

biosample

Your browsing activity is empty.

Activity recording is turned off.

Turn recording back on

See more...

You are here: NCBI > DNA & RNA > BioSample