Microbe sample from Thiothrix sp. - BioSample - NCBI

Warning: The NCBI web site requires JavaScript to function. more...

Result Filters

Microbe sample from Thiothrix sp.

Identifiers: BioSample: SAMN09638825; Sample name: Uncultivated Thiothrix sp. HyVt-607 genome recovered from SRR5149596; SRA: SRS3740328

Organism: Thiothrix sp.
cellular organisms; Bacteria; Pseudomonadota; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thiothrix; unclassified Thiothrix

Package: Microbe; version 1.0

Attributes

isolate	HyVt-607
isolation source	terrigenous sediment of marine hydrothermal vent
collection date	2014-04-28
geographic location	China:Taiwan
sample type	metagenomic assembly
latitude and longitude	24.83499 N 121.96209 E
subsource note	Metagenome-assembled genome binned from sequencing reads available in SRR5149596
metagenome source	hydrothermal vent metagenome
assembly_method_and_version	MEGAHIT v1.1.2
completeness_estimated	65.64
contamination_estimated	6.83
quality_assessment_method_and_version	CheckM v1.0.7
environmental-sample	true
genome_coverage	16.82
mapping_method_and_version	Bowtie 2 v2.2.8
metagenomic	true

BioProject: PRJNA480137 metagenomes
Retrieve all samples from this project

Submission: The University of Hong Kong, Zhichao Zhou; 2018-07-11

Accession:: SAMN09638825
ID:: 9638825

BioProject SRA Nucleotide

Supplemental Content

Related information

BioProject
BioProject links
SRA
Links to SRA experiments
Nucleotide
Nucleotide links
Assembly
Assembly
Taxonomy
Links to Taxonomy

Recent activity

Clear Turn Off Turn On

Microbe sample from Thiothrix sp.
Microbe sample from Thiothrix sp.

biosample

Your browsing activity is empty.

Activity recording is turned off.

Turn recording back on

See more...

You are here: NCBI > DNA & RNA > BioSample