Microbe sample from Halothiobacillus sp. - BioSample - NCBI

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Microbe sample from Halothiobacillus sp.

Identifiers: BioSample: SAMN09639048; Sample name: Uncultivated Halothiobacillus sp. SpSt-1137 genome recovered from SRR5216258; SRA: SRS3740793

Organism: Halothiobacillus sp.
cellular organisms; Bacteria; Pseudomonadota; Gammaproteobacteria; Chromatiales; Halothiobacillaceae; Halothiobacillus; unclassified Halothiobacillus

Package: Microbe; version 1.0

Attributes

isolate	SpSt-1137
isolation source	hot spring sediment
collection date	2014-09-02
geographic location	USA: California
sample type	metagenomic assembly
latitude and longitude	39.0348 N 122.4271 W
subsource note	Metagenome-assembled genome binned from sequencing reads available in SRR5216258
metagenome source	sediment metagenome
assembly_method_and_version	DOE-JGI IMG deposited assembly (IMG Genome ID: 3300010258)
completeness_estimated	35.87
contamination_estimated	1.63
quality_assessment_method_and_version	CheckM v1.0.7
environmental-sample	true
genome_coverage	304.77
mapping_method_and_version	Bowtie 2 v2.2.8
metagenomic	true

BioProject: PRJNA480137 metagenomes
Retrieve all samples from this project

Submission: The University of Hong Kong, Zhichao Zhou; 2018-07-11

Accession:: SAMN09639048
ID:: 9639048

BioProject SRA Nucleotide

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