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Microbe sample from Synergistota bacterium

Identifiers
BioSample: SAMN09639136; Sample name: Uncultivated Synergistetes bacterium SpSt-1216 genome recovered from SRR5216255; SRA: SRS3740169
Organism
Synergistota bacterium
cellular organisms; Bacteria; Synergistota; unclassified Synergistota
Package
Microbe; version 1.0
Attributes
isolateSpSt-1216
isolation sourcehot spring sediment
collection date2014-09-02
geographic locationUSA: California
sample typemetagenomic assembly
latitude and longitude39.0314 N 122.4323 W
subsource noteMetagenome-assembled genome binned from sequencing reads available in SRR5216255
metagenome sourcesediment metagenome
assembly_method_and_versionDOE-JGI IMG deposited assembly (IMG Genome ID: 3300010291)
completeness_estimated71.49
contamination_estimated1.85
quality_assessment_method_and_versionCheckM v1.0.7
environmental-sampletrue
genome_coverage8.84
mapping_method_and_versionBowtie 2 v2.2.8
metagenomictrue
BioProject
PRJNA480137 metagenomes
Retrieve all samples from this project

Submission
The University of Hong Kong, Zhichao Zhou; 2018-07-11
Accession:
SAMN09639136
ID:
9639136

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