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Microbe sample from Alphaproteobacteria bacterium

Identifiers
BioSample: SAMN09639170; Sample name: Uncultivated Alphaproteobacteria bacterium SpSt-1247 genome recovered from SRR5214154; SRA: SRS3740296
Organism
Alphaproteobacteria bacterium
cellular organisms; Bacteria; Pseudomonadota; Alphaproteobacteria; unclassified Alphaproteobacteria
Package
Microbe; version 1.0
Attributes
isolateSpSt-1247
isolation sourcehot spring sediment
collection date2013-12-03
geographic locationUSA: Zodletone Spring, Oklahoma
sample typemetagenomic assembly
latitude and longitude34.9956 N 98.6889 W
subsource noteMetagenome-assembled genome binned from sequencing reads available in SRR5214154
metagenome sourcehot springs metagenome
assembly_method_and_versionDOE-JGI IMG deposited assembly (IMG Genome ID: 3300010393)
completeness_estimated28.06
contamination_estimated6.03
quality_assessment_method_and_versionCheckM v1.0.7
environmental-sampletrue
genome_coverage36.17
mapping_method_and_versionBowtie 2 v2.2.8
metagenomictrue
BioProject
PRJNA480137 metagenomes
Retrieve all samples from this project

Submission
The University of Hong Kong, Zhichao Zhou; 2018-07-11
Accession:
SAMN09639170
ID:
9639170

BioProject SRA Nucleotide

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