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Animal sample from Gallus gallus (bGalGal3)

Identifiers
BioSample: SAMN15960293; Sample name: Chicken sample for VGP-GRC reference genome child of trio
Organism
Gallus gallus (chicken)
cellular organisms; Eukaryota; Opisthokonta; Metazoa; Eumetazoa; Bilateria; Deuterostomia; Chordata; Craniata; Vertebrata; Gnathostomata; Teleostomi; Euteleostomi; Sarcopterygii; Dipnotetrapodomorpha; Tetrapoda; Amniota; Sauropsida; Sauria; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
Package
Model organism or animal; version 1.0
Attributes
isolatebGalGal1
age35 days
sexfemale
tissueBlood
biomaterial providerUniversity of Arkansas
birth date15-Apr-2019
breedCross of Broiler mother + white leghorn layer father
collected byNick Anthony
collection date2019-05-20
geographic locationUSA:Fayetteville, Arkansas
latitude and longitude36.0822 N 94.1719 W
storage conditionsfresh
treatmentEthanol
developmental_agejuvenile
Description

The chicken has been the most studied bird. It serves as a model organism for basic and biomedical science, and is one of the most commonly consumed food sources for humans. This trio of samples was collected to create a high-quality reference genome for two haplotypes. The female offspring (bGalGal1) is a cross between a modern broiler breeder mother (bGalGal2) and white Leghorn father (bGalGal3). Breeding and sample collection was conducted by Nick Anthony at the University of Arkansas, in coordination with Wesley Warren, Ron Okimoto, Hans Cheng, and Rachel Hawken. Blood from these samples were used to create high-quality reference genome assemblies of each haplotype, coordinated by Erich Jarvis, Wesley Warren, and Olivier Fedrigo, at the Rockefeller University Vertebrate Genome Lab, as part of the Vertebrate Genomes Project (VGP) and the Genome Reference Consortium (GRC).

BioProjects
PRJNA717184 Gallus gallus
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PRJNA698614 Gallus gallus isolate:bGalGal1
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PRJNA698609 Gallus gallus isolate:bGalGal1
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PRJNA660758 Gallus gallus isolate:bGalGal1
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PRJNA660757 Gallus gallus isolate:bGalGal1
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Submission
G10K, Erich Jarvis; 2020-09-01
Accession:
SAMN15960293
ID:
15960293

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