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BioSample

National Center for Biotechnology Information

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MAG82

Identifiers: BioSample: SAMN18623635; Sample name: MAG82

Organism: Chloroflexota bacterium
cellular organisms; Bacteria; Terrabacteria group; Chloroflexota; unclassified Chloroflexota

Package: MIMAG: metagenome-assembled genome, soil; version 6.0

Attributes

isolate	MAG82
collection date	2017-04
depth	10cm
elevation	4480 masl
broad-scale environmental context	arid biome[ENVO:01001838]\|montane biome [ENVO:01001836]
local-scale environmental context	slope[ENVO:00002000]\|bare soil [ENVO:01001616]
environmental medium	steppe soil[ENVO:00005777]\|soil organic matter[ENVO:04000008]
geographic location	Chile: Atacama Desert, between Atacama Salar and Lejia lagoon
latitude and longitude	23.5033 S 67.7063 W
reference for biomaterial	['Gonzalez et al "Genomic analysis provides insights into the functional capacity of soil bacteria communities inhabiting an altitudinal gradient in the Atacama Desert." Microbiome Journal (to be submitted)', '']
isolation source	bare soil
sample type	metagenomic assembly
metagenome source	soil metagenome
derived from	SAMN20751031
Lab_custom_name	MAG82
metagenomic	1
environmental-sample	1

Description: Keywords: GSC:MIxS;MIMAG:6.0

BioProject: PRJNA291433
Retrieve all samples from this project

Submission: Center for Genome Regulation (CRG), Ricardo Palma Vejares; 2021-04-05

Accession:: SAMN18623635
ID:: 18623635

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MAG82
MAG82

biosample
Profile neighbors for GEO Profiles (Select 29981440) (116)
GEO Profiles
Aspergillus quadrilineatus strain NRRL 201 isolate USDA, whole genome shotgun se...
Aspergillus quadrilineatus strain NRRL 201 isolate USDA, whole genome shotgun sequencing project
gi|1851249441|gb|JAAXYA000000000.1| A010000000

Nucleotide
PREDICTED: Homo sapiens SS18 subunit of BAF chromatin remodeling complex (SS18),...
PREDICTED: Homo sapiens SS18 subunit of BAF chromatin remodeling complex (SS18), transcript variant X8, mRNA
gi|2462561306|ref|XM_054319033.1|

Nucleotide
Homologene neighbors for GEO Profiles (Select 131631233) (0)
GEO Profiles

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