Australian marsupial phylogenetic study. Bioplatfo... - BioSample

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Result Filters

Organism: Sminthopsis longicaudata (long-tailed dunnart)
cellular organisms; Eukaryota; Opisthokonta; Metazoa; Eumetazoa; Bilateria; Deuterostomia; Chordata; Craniata; Vertebrata; Gnathostomata; Teleostomi; Euteleostomi; Sarcopterygii; Dipnotetrapodomorpha; Tetrapoda; Amniota; Mammalia; Theria; Metatheria; Dasyuromorphia; Dasyuridae; Sminthopsis

Attributes

geographic location	Australia
investigation type	phylogenetic study
sample name	40091
sex	not determined
tissue	kidney \| liver
AtlasLivingAustralia	https://biocache.ala.org.au/occurrences/b29db762-ca49-410b-87e3-724f4712cf57
BPA_library_ID	52722
BPA_sample_ID	40091
CALLABLE	1825858
DNA extraction method	salting out
ENA-CHECKLIST	ERC000011
ENA-FIRST-PUBLIC	2021-01-05T04:27:28Z
ENA-LAST-UPDATE	2020-09-25T00:33:39Z
External Id	SAMEA7321000
INSDC center name	AUSTRALIAN NATIONAL UNIVERSITY
INSDC first public	2021-01-05T04:27:28Z
INSDC last update	2020-09-25T00:33:39Z
INSDC status	public
LOW_COVERAGE	139803
NO_COVERAGE	204
ReadLength	100bp
Submitter Id	40091
TCCP_ID	40091_LANES3
bioproject_accession	PRJEB39788
class	Mammalia
collection	Mammal
common name	long-tailed dunnart
depthmean	644.7
depthmedian	290
family	Dasyuridae
genus	Sminthopsis
geographic location (region and locality)	Western Australia
institution_name	Australian Biological Tissue Collection, South Australian Museum
location_text	Young Range
order	Dasyuromorphia
phylum	Chordata
scientific_name	Sminthopsis longicaudata
sequencing method	Illumina SBS, short PE reads
species	longicaudata
state_or_region	Western Australia
tissue_number	ABTC07758
tissue_preservation	frozen
totalmapped2tgt	0.5224
totalpaired	0.4766
totalreadsstart	26302906
voucher_number	WAM M24531
voucher_or_tissue_number	WAM M24531
wild_captive	wild