Australian marsupial phylogenetic study. Bioplatfo... - BioSample

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Result Filters

Organism: Sminthopsis crassicaudata (fat-tailed dunnart)
cellular organisms; Eukaryota; Opisthokonta; Metazoa; Eumetazoa; Bilateria; Deuterostomia; Chordata; Craniata; Vertebrata; Gnathostomata; Teleostomi; Euteleostomi; Sarcopterygii; Dipnotetrapodomorpha; Tetrapoda; Amniota; Mammalia; Theria; Metatheria; Dasyuromorphia; Dasyuridae; Sminthopsis

Attributes

geographic location	Australia
identified by	R J Teale
investigation type	phylogenetic study
sample name	55350
sex	male
tissue	liver
AtlasLivingAustralia	https://biocache.ala.org.au/occurrences/aba379b8-6e9c-434a-8a6a-1fce285163b0
BPA_library_ID	55350
BPA_sample_ID	41939
CALLABLE	1580871
DNA extraction method	salting out
ENA-CHECKLIST	ERC000011
ENA-FIRST-PUBLIC	2021-01-05T04:27:29Z
ENA-LAST-UPDATE	2020-09-25T00:43:03Z
External Id	SAMEA7321330
INSDC center name	AUSTRALIAN NATIONAL UNIVERSITY
INSDC first public	2021-01-05T04:27:29Z
INSDC last update	2020-09-25T00:43:03Z
INSDC status	public
LOW_COVERAGE	159005
NO_COVERAGE	154
ReadLength	150bp
Submitter Id	55350
TCCP_ID	55350_HWWJFAFXY_CGACGGT_S52
bioproject_accession	PRJEB39788
class	Mammalia
collection	Mammal
common name	fat-tailed dunnart
decimal_latitude	-30.48
decimal_longitude	120.52
depthmean	107.68
depthmedian	77
family	Dasyuridae
genus	Sminthopsis
geographic location (region and locality)	Western Australia
institution_name	Australian Biological Tissue Collection, South Australian Museum
location_text	38km W Carbine
order	Dasyuromorphia
phylum	Chordata
scientific_name	Sminthopsis crassicaudata
sequencing method	Illumina SBS, short PE reads
species	crassicaudata
state_or_region	Western Australia
tissue_number	ABTC63543
tissue_preservation	ethanol \| frozen
totalmapped2tgt	0.7869
totalpaired	0.7696
totalreadsstart	2053714
voucher_number	WAM M47055
voucher_or_tissue_number	WAM M47055