U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from Assembly

Uncultivated Thermodesulfobacterium commune genome recovered from SRX997729

Identifiers
BioSample: SAMN08017432; Sample name: UBA12529; SRA: SRS2842960
Organism
Thermodesulfobacterium commune
cellular organisms; Bacteria; Thermodesulfobacteriota; Thermodesulfobacteria; Thermodesulfobacteriales; Thermodesulfobacteriaceae; Thermodesulfobacterium
Package
Microbe; version 1.0
Attributes
isolateUBA12529
isolation sourceterrestrial
collection datenot applicable
geographic locationnot applicable
sample typemetagenomic assembly
metagenome sourceterrestrial metagenome
assembly_methodCLC de novo assembler
assembly_method_version4.4.1
mapping_methodBWA (BWA-MEM)
mapping_method_version0.7.12-r1039
genome_coverage15.10x
quality_assessment_methodCheckM
quality_assessment_method_version1.0.6
completeness_estimated92.29%
contamination_estimated1.67%
environmental_sampletrue
metagenomictrue
noteterrestrial metagenome
valueThis BioSample is a metagenomic assembly obtained from the terrestrial metagenome reads: SRR1977365.
Description

Uncultivated genome recovered from an assembly of the SRX997729 metagenome.

BioProject
PRJNA417962 metagenome-assembled genomes
Retrieve all samples from this project

Submission
University of Queensland, Donovan Parks; 2017-11-13
Accession:
SAMN08017432
ID:
8017432

BioProject SRA Nucleotide

Supplemental Content

Related information

Recent activity

Clear Turn Off Turn On

Your browsing activity is empty.

Activity recording is turned off.

Turn recording back on

See more...
You are here: NCBI > DNA & RNA > BioSample
Support Center