MIGS Cultured Bacterial/Archaeal sample from Dorea... - BioSample

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MIGS Cultured Bacterial/Archaeal sample from Dorea formicigenerans ATCC 27755

Identifiers: BioSample: SAMN00000008; Sample name: 18155; SRA: SRS000008

Organism: Dorea formicigenerans ATCC 27755
cellular organisms; Bacteria; Terrabacteria group; Bacillota; Clostridia; Lachnospirales; Lachnospiraceae; Dorea; Dorea formicigenerans

Package: MIGS: cultured bacteria/archaea; version 6.0

Attributes

collection date	not determined
estimated size	3186000
host	Homo sapiens
latitude and longitude	not determined
broad-scale environmental context	terrestrial biome [ENVO:00000446]
local-scale environmental context	human-associated habitat [ENVO:00009003]
investigation type	missing
host taxonomy ID	9606 (9606)
project name	Dorea formicigenerans ATCC 27755
geographic location	not determined
source material identifiers	ATCC 27755
environmental medium	biological product [ENVO:02000043]
reference for biomaterial	not determined
number of replicons	not determined
isolation and growth condition	not determined
environmental package	missing
isolation source	missing
strain	ATCC 27755
finishing strategy (depth of coverage)	Level 3: Improved-High-Quality Draft7.5x;16
sop	http://hmpdacc.org/doc/CommonGeneAnnotation_SOP.pdf
project_type	Reference Genome
misc_param: HMP body site	not determined
nucleic acid extraction	not determined
assembly	PCAP
misc_param: HMP supersite	gastrointestinal_tract
sequencing method	454, Sanger
type-material	type strain of Eubacterium formicigenerans

Description

Dorea formicigenerans (GenBank Accession Number for 16S rRNA gene: L34619) is a member of the Firmicutes division of the domain bacteria. In one comprehensive 16S rDNA sequence- based enumeration of the colonic microbiota of three healthy adult humans, it represents, on average, 0.617% of all 16S rDNA sequences and 1.215% of the sequences in its division (Eckburg et. al. (2005)).

Keywords: GSC:MIxS;MIGS:6.0

Links: DNA Source

BioProjects: PRJNA266358 Vigna
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PRJNA259296 soil metagenome
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PRJNA259295 soil metagenome
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PRJNA18155 Dorea formicigenerans ATCC 27755
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