Australian marsupial phylogenetic study. Bioplatfo... - BioSample

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Result Filters

Organism: Planigale gilesi (flat-skulled marsupial mouse)
cellular organisms; Eukaryota; Opisthokonta; Metazoa; Eumetazoa; Bilateria; Deuterostomia; Chordata; Craniata; Vertebrata; Gnathostomata; Teleostomi; Euteleostomi; Sarcopterygii; Dipnotetrapodomorpha; Tetrapoda; Amniota; Mammalia; Theria; Metatheria; Dasyuromorphia; Dasyuridae; Planigale

Attributes

geographic location	Australia
investigation type	phylogenetic study
sample name	52903
sex	male
tissue	liver
AtlasLivingAustralia	https://biocache.ala.org.au/occurrences/40319ce6-ac3f-4b11-bfbe-2b87147514de
BPA_library_ID	52903
BPA_sample_ID	40275
CALLABLE	1970350
DNA extraction method	salting out
ENA-CHECKLIST	ERC000011
ENA-FIRST-PUBLIC	2021-01-05T04:27:30Z
ENA-LAST-UPDATE	2020-09-25T00:35:07Z
External Id	SAMEA7321046
INSDC center name	AUSTRALIAN NATIONAL UNIVERSITY
INSDC first public	2021-01-05T04:27:30Z
INSDC last update	2020-09-25T00:35:07Z
INSDC status	public
LOW_COVERAGE	170605
NO_COVERAGE	131
ReadLength	100bp
Submitter Id	52903
TCCP_ID	52903_AH5VVVBCX2_CAGCATC_S82
bioproject_accession	PRJEB39788
class	Mammalia
collection	Mammalogy
common name	flat-skulled marsupial mouse
decimal_latitude	-29.32
decimal_longitude	142.13
depthmean	124.78
depthmedian	85
family	Dasyuridae
genus	Planigale
geographic location (region and locality)	New South Wales
institution_name	Australian Museum
location_text	Sturt National Park, Site 34.
order	Dasyuromorphia
phylum	Chordata
scientific_name	Planigale gilesi
sequencing method	Illumina SBS, short PE reads
species	gilesi
state_or_region	New South Wales
tissue_number	EBU34353
tissue_preservation	frozen
totalmapped2tgt	0.7212
totalpaired	0.6786
totalreadsstart	4061818
voucher_number	AM M.35395.001
voucher_or_tissue_number	AM M.35395.001