MIGS Cultured Bacterial/Archaeal sample from Veill... - BioSample

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Result Filters

Identifiers: BioSample: SAMN00116785; Sample name: HMPREF9199; SRA: SRS118318

Organism: Veillonella sp. oral taxon 158 str. F0412
cellular organisms; Bacteria; Terrabacteria group; Bacillota; Negativicutes; Veillonellales; Veillonellaceae; Veillonella; unclassified Veillonella; Veillonella sp. oral taxon 158

Attributes

collection date	not determined
estimated size	2177000
isolation and growth condition	not determined
host	Homo sapiens
latitude and longitude	not determined
broad-scale environmental context	terrestrial biome [ENVO:00000446]
investigation type	missing
local-scale environmental context	human-associated habitat [ENVO:00009003]
host taxonomy ID	9606 (9606)
project name	Veillonella sp. oral taxon 158 F0412
geographic location	not determined
source material identifiers	BEI HM-562
environmental medium	biological product [ENVO:02000043]
reference for biomaterial	not determined
number of replicons	not determined
strain	F0412
environmental package	missing
isolation source	missing
finishing strategy (depth of coverage)	Level 2: High-Quality Draft17.7x;21
project_type	Reference Genome
misc_param: HMP body site	not determined
nucleic acid extraction	not determined
assembly	Celera Assembler v. 6.1
misc_param: HMP supersite	oral
sequencing method	454-GS-FLX-Titanium
sop	http://hmpdacc.org/doc/CommonGeneAnnotation_SOP.pdf