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Links from BioSystems

Items: 20

1.

Oxidative phosphorylation

Type
:
pathway
Taxonomic scope
:
organism-specific biosystem
Organism
:
Escherichia coli str. K-12 substr. MG1655
2.

NADH:quinone oxidoreductase, prokaryotes

Structural complex; Energy metabolism; ATP synthesis

Type
:
structural_complex
Taxonomic scope
:
organism-specific biosystem
Organism
:
Escherichia coli str. K-12 substr. MG1655
3.

F-type ATPase, prokaryotes and chloroplasts

Structural complex; Energy metabolism; ATP synthesis

Type
:
structural_complex
Taxonomic scope
:
organism-specific biosystem
Organism
:
Escherichia coli str. K-12 substr. MG1655
BSID:
405218
KEGG
: eco_M00157
4.

Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate

Pathway module; Carbohydrate and lipid metabolism; Central carbohydrate metabolism

Type
:
pathway
Taxonomic scope
:
organism-specific biosystem
Organism
:
Escherichia coli str. K-12 substr. MG1655
5.

Citrate cycle (TCA cycle, Krebs cycle)

Pathway module; Carbohydrate and lipid metabolism; Central carbohydrate metabolism

Type
:
pathway
Taxonomic scope
:
organism-specific biosystem
Organism
:
Escherichia coli str. K-12 substr. MG1655
6.

Citrate cycle (TCA cycle)

The citrate cycle (TCA cycle, Krebs cycle) is an important aerobic pathway for the final steps of the oxidation of carbohydrates and fatty acids. The cycle starts with acetyl-CoA, the activated form of acetate, derived from glycolysis and pyruvate oxidation for carbohydrates and from...

Type
:
pathway
Taxonomic scope
:
organism-specific biosystem
Organism
:
Escherichia coli str. K-12 substr. MG1655
7.

Butanoate metabolism

Type
:
pathway
Taxonomic scope
:
organism-specific biosystem
Organism
:
Escherichia coli str. K-12 substr. MG1655
8.

Cytochrome o ubiquinol oxidase

Structural complex; Energy metabolism; ATP synthesis

Type
:
structural_complex
Taxonomic scope
:
organism-specific biosystem
Organism
:
Escherichia coli str. K-12 substr. MG1655
BSID:
405291
KEGG
: eco_M00417
9.

Cytochrome d ubiquinol oxidase

Structural complex; Energy metabolism; ATP synthesis

Type
:
structural_complex
Taxonomic scope
:
organism-specific biosystem
Organism
:
Escherichia coli str. K-12 substr. MG1655
BSID:
405217
KEGG
: eco_M00153
10.

Fumarate reductase, prokaryotes

Structural complex; Energy metabolism; ATP synthesis

Type
:
structural_complex
Taxonomic scope
:
organism-specific biosystem
Organism
:
Escherichia coli str. K-12 substr. MG1655
11.

Succinate dehydrogenase, prokaryotes

Structural complex; Energy metabolism; ATP synthesis

Type
:
structural_complex
Taxonomic scope
:
organism-specific biosystem
Organism
:
Escherichia coli str. K-12 substr. MG1655
12.

Carbon metabolism

Carbon metabolism is the most basic aspect of life. This map presents an overall view of central carbon metabolism, where the number of carbons is shown for each compound denoted by a circle, excluding a cofactor (CoA, CoM, THF, or THMPT) that is replaced by an asterisk. The map contains...

Type
:
pathway
Taxonomic scope
:
organism-specific biosystem
Organism
:
Escherichia coli str. K-12 substr. MG1655
13.

Metabolic pathways

Type
:
pathway
Taxonomic scope
:
organism-specific biosystem
Organism
:
Escherichia coli str. K-12 substr. MG1655
14.

Two-component system

Two-component signal transduction systems enable bacteria to sense, respond, and adapt to changes in their environment or in their intracellular state. Each two-component system consists of a sensor protein-histidine kinase (HK) and a response regulator (RR). In the prototypical two-component...

Type
:
pathway
Taxonomic scope
:
organism-specific biosystem
Organism
:
Escherichia coli str. K-12 substr. MG1655
15.

Pyruvate metabolism

Type
:
pathway
Taxonomic scope
:
organism-specific biosystem
Organism
:
Escherichia coli str. K-12 substr. MG1655
16.

Biosynthesis of antibiotics

Type
:
pathway
Taxonomic scope
:
organism-specific biosystem
Organism
:
Escherichia coli str. K-12 substr. MG1655
17.

Microbial metabolism in diverse environments

Type
:
pathway
Taxonomic scope
:
organism-specific biosystem
Organism
:
Escherichia coli str. K-12 substr. MG1655
18.

Biosynthesis of secondary metabolites

Type
:
pathway
Taxonomic scope
:
organism-specific biosystem
Organism
:
Escherichia coli str. K-12 substr. MG1655
19.

RNA degradation

The correct processing, quality control and turnover of cellular RNA molecules are critical to many aspects in the expression of genetic information. In eukaryotes, two major pathways of mRNA decay exist and both pathways are initiated by poly(A) shortening of the mRNA. In the 5'...

Type
:
pathway
Taxonomic scope
:
organism-specific biosystem
Organism
:
Escherichia coli str. K-12 substr. MG1655
20.

Porphyrin and chlorophyll metabolism

Type
:
pathway
Taxonomic scope
:
organism-specific biosystem
Organism
:
Escherichia coli str. K-12 substr. MG1655

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