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Links from BioSystems

Items: 1 to 20 of 94

1.

Metabolic pathways

Type
:
pathway
Taxonomic scope
:
organism-specific biosystem
Organism
:
Candida tropicalis MYA-3404
2.

Biosynthesis of secondary metabolites

Type
:
pathway
Taxonomic scope
:
organism-specific biosystem
Organism
:
Candida tropicalis MYA-3404
3.

Biosynthesis of antibiotics

Type
:
pathway
Taxonomic scope
:
organism-specific biosystem
Organism
:
Candida tropicalis MYA-3404
4.

Biosynthesis of amino acids

This map presents a modular architecture of the biosynthesis pathways of twenty amino acids, which may be viewed as consisting of the core part and its extensions. The core part is the KEGG module for conversion of three-carbon compounds from glyceraldehyde-3P to pyruvate [MD:M00002],...

Type
:
pathway
Taxonomic scope
:
organism-specific biosystem
Organism
:
Candida tropicalis MYA-3404
5.

Carbon metabolism

Carbon metabolism is the most basic aspect of life. This map presents an overall view of central carbon metabolism, where the number of carbons is shown for each compound denoted by a circle, excluding a cofactor (CoA, CoM, THF, or THMPT) that is replaced by an asterisk. The map contains...

Type
:
pathway
Taxonomic scope
:
organism-specific biosystem
Organism
:
Candida tropicalis MYA-3404
6.

Purine metabolism

Type
:
pathway
Taxonomic scope
:
organism-specific biosystem
Organism
:
Candida tropicalis MYA-3404
7.

Pyrimidine metabolism

Type
:
pathway
Taxonomic scope
:
organism-specific biosystem
Organism
:
Candida tropicalis MYA-3404
8.

Oxidative phosphorylation

Type
:
pathway
Taxonomic scope
:
organism-specific biosystem
Organism
:
Candida tropicalis MYA-3404
9.

Glycolysis / Gluconeogenesis

Glycolysis is the process of converting glucose into pyruvate and generating small amounts of ATP (energy) and NADH (reducing power). It is a central pathway that produces important precursor metabolites: six-carbon compounds of glucose-6P and fructose-6P and three-carbon compounds...

Type
:
pathway
Taxonomic scope
:
organism-specific biosystem
Organism
:
Candida tropicalis MYA-3404
10.

Cysteine and methionine metabolism

Cysteine and methionine are sulfur-containing amino acids. Cysteine is synthesized from serine through different pathways in different organism groups. In bacteria and plants, cysteine is converted from serine (via acetylserine) by transfer of hydrogen sulfide [MD:M00021]. In animals,...

Type
:
pathway
Taxonomic scope
:
organism-specific biosystem
Organism
:
Candida tropicalis MYA-3404
11.

Glycine, serine and threonine metabolism

Serine is derived from 3-phospho-D-glycerate, an intermediate of glycolysis [MD:M00020], and glycine is derived from serine. Threonine is an essential amino acid, which animals cannot synthesize. In bacteria and plants, threonine is derived from aspartate [MD:M00018].

Type
:
pathway
Taxonomic scope
:
organism-specific biosystem
Organism
:
Candida tropicalis MYA-3404
12.

2-Oxocarboxylic acid metabolism

2-Oxocarboxylic acids, also called 2-oxo acids and alpha-keto acids, are the most elementary set of metabolites that includes pyruvate (2-oxopropanoate), 2-oxobutanoate, oxaloacetate (2-oxosuccinate) and 2-oxoglutarate. This diagram illustrates the architecture of chain extension...

Type
:
pathway
Taxonomic scope
:
organism-specific biosystem
Organism
:
Candida tropicalis MYA-3404
13.

Various types of N-glycan biosynthesis

Type
:
pathway
Taxonomic scope
:
organism-specific biosystem
Organism
:
Candida tropicalis MYA-3404
14.

Methane metabolism

Methane is metabolized principally by methanotrophs and methanogens in the global carbon cycle. Methanotrophs consume methane as the only source of carbon, while methanogens produce methane as a metabolic byproduct. Methylotrophs, which are microorganisms that can obtain energy for...

Type
:
pathway
Taxonomic scope
:
organism-specific biosystem
Organism
:
Candida tropicalis MYA-3404
15.

Alanine, aspartate and glutamate metabolism

Type
:
pathway
Taxonomic scope
:
organism-specific biosystem
Organism
:
Candida tropicalis MYA-3404
16.

Fatty acid metabolism

Type
:
pathway
Taxonomic scope
:
organism-specific biosystem
Organism
:
Candida tropicalis MYA-3404
17.

Citrate cycle (TCA cycle, Krebs cycle)

Pathway module; Carbohydrate and lipid metabolism; Central carbohydrate metabolism

Type
:
pathway
Taxonomic scope
:
organism-specific biosystem
Organism
:
Candida tropicalis MYA-3404
18.

RNA polymerase

Type
:
pathway
Taxonomic scope
:
organism-specific biosystem
Organism
:
Candida tropicalis MYA-3404
19.

Glyoxylate and dicarboxylate metabolism

Type
:
pathway
Taxonomic scope
:
organism-specific biosystem
Organism
:
Candida tropicalis MYA-3404
20.

Pyruvate metabolism

Type
:
pathway
Taxonomic scope
:
organism-specific biosystem
Organism
:
Candida tropicalis MYA-3404

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