5VSU


Conserved Protein Domain Family
Lsm_interact
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pfam05391: Lsm_interact 
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Lsm interaction motif
This short motif is found at the C-terminus of Prp24 proteins and probably interacts with the Lsm proteins to promote U4/U6 formation.
Links
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Statistics
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PSSM-Id: 398843
Aligned: 16 rows
Threshold Bit Score: 36.7304
Created: 22-Mar-2022
Updated: 17-Oct-2022
Structure
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Program:
Drawing:
Aligned Rows:
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Sequence Alignment
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Format: Row Display: Color Bits: Type Selection: 
5VSU_A        425 IPDKQEQMSNDDFRKMFLG 443  Saccharomyces cerevisiae S288C
Q9USY2        996 EMQIDAPKSNDDFRKMFLK 1014 Schizosaccharomyces pombe 972h-
EFH43929      801 PSADETPKSNDEFRNMFLK 819 
XP_009137894  804 IAVDETPKSNDEFRNMFLK 822 
Q6CNP2        413 ASQNDKKLSNDDFRKLFLS 431  Kluyveromyces lactis
EKC27682       53 ASATATKMSNDDFRKMLLK 71  
RMC05818      910 PPAEPKKMSNADFAKMLLK 928 
XP_003477885  942 AASEAPKMSNADFAKLLLK 960 
XP_008182141  252 SADDKTPLNNEDFRKMLLG 270 
EFO93770      843 SSSSSTPLSNDQFRKLFMR 861
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