Conserved Protein Domain Family
HTH_ABP1_N

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pfam18107: HTH_ABP1_N 
Fission yeast centromere protein N-terminal domain
This domain is found in the fission yeast centromere protein (Abp1) in species such as Shizosaccharomyces pombe. The domain, referred to as Domain 1, is DNA-binding and makes up half of the N-terminal region.
Statistics
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PSSM-Id: 407941
Aligned: 13 rows
Threshold Bit Score: 87.3451
Created: 26-Mar-2022
Updated: 17-Oct-2022
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
CDM27388       6 R-RSAlgISGTQKQALRIWAQSQNPRPSQSQCSAWFERTYGRNLSQSTISTILSKKFDHLDAGP 68 
XP_013023607   5 R-RQV--ITKIEKKALRNYYFGCVEKPSQQKLMAWFRQHFDKELSQPSVSQILSSKYDFLDEAT 65 
EPY51118       5 RtRIT--VSGREKKALRAFYYNQARKPTQVELADWFKSEFGKPIAQSTLSRILSDRFAYLDDTD 66 
EDN99966       4 S-RTP--ISHSQRIALRRYYQTMNPKPSQSDLRAWFKSRFGYDISQSIVSRSLSDSFAYLDVCV 64 
Q2U0W4         2 Q-RRP--ISNSQKLALRSQH-ALKPYLTQLQLCQWFEAEYQQPIAESSVSRILSSRYDSLDGAS 61  Aspergillus oryzae
EED22581       9 R-RKA--IPNEWKAALRAPH-RINHHLTHQNLRKWFEDTYNQPIDRATVTRILSSKYAFIDELQ 68 
XP_001246175   3 R-RTA--IPIERKKALRAHKLQHSS-LSNKTLKQWFEQHYNQTIALSSVSEILSSRYDYLDQTA 62 
KEQ86338      18 K-RFP--MTNGQRKALRDR-ARLTPHGRQKDLCSWFLERFGHTPSQGTISDSLSAKYDWLDDPN 77 
CRG87531       4 K-RNR--LSDVQRKEIRDWWFTQNPRPHQKAIVTWFFQRYGKNISQSSICDCLSSRYEYLDRMD 64 
KGQ07830      29 E-RHS--LTLDQRRALRRWASSQVMRPSHRACIDWFFSQYGQMISQSTVSHSLSPKYSRLDGEH 89 
KFZ16898       3 R-KQR--IHIHQRQALRAWAFKQTPRPSQKACITWFYDKYSQRIGQSTVSESLSAHFESIDNSE 63 
KHJ32157       2 A-RKS--ILKRERRELRAWYIQQQPRPSHRECITWFEEKFHQKLTQGTISKSLSHRYSHLDDYN 62 
EPS28527      10 K-KEG--IPEAQKKALRAWHRAQEKRPTHAASREWFERTFNRRLPPSTLSLILSSKYAYLDLGS 70 
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