Conserved Protein Domain Family
DUF5622

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pfam18533: DUF5622 
Domain of unknown function (DUF5622)
This is a domain of unknown function found in archaea-specific ribosomal proteins such as L46a which is suggested to directly bind to rRNA in the ribosome.
Statistics
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PSSM-Id: 408320
Aligned: 14 rows
Threshold Bit Score: 71.2241
Created: 27-Mar-2022
Updated: 17-Oct-2022
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
jgi:Smar_1314 13 LKHGKYIYVERK-DGWYVKVRVLnirlkkKDKKEkysfdINDPEKYLVLQVKTRKPPFKAQIMREDDVPDEVKKALYQ 89 
WP_013129081   3 LKHGKYVYVDRL-DGSYVKVRVLnirfhkKTEEKi---dVTNPTRYIVTGTVVSKPPARAIVISIEALPEEVRNLVRS 76  Thermosphaera agg...
jgi:Msed_1729  3 LKHEKYVYVELG-KSRYAKLRVL------KNRDE------NSPERYIVLNKLVPKKSRHVKVLKTDDLPLEVREKLKA 67 
Q4J953         2 LKHQKYVYVDIGdQKKFLKVRFL------KSRSE-----NNNPEAYVILDKISIKLPRNAKVIKYEDLPAEVKDKLKL 68  Sulfolobus acidoc...
EWG07069       3 LKHKKYVYIDTG-KGFYVKARLL------KNRDE------NSAERYVLLNITPKTRPRKASVLKLDNLPLEIKEKVSK 67 
WP_013776195   2 LKHKKYLYVDTG--KYFIKVRVL------KNRDE------NSPDSYIVVSKNIKK-PRNALVKKLEDLPIEVRDKISK 64  Acidianus
jgi:Igag_0231  3 LKHGKYVYVKRS-DGYYIKVRVL------KSRGD------EDQDKYIVIGPKTHKVPPTATIIREEQLPEKIREKLYA 67 
Q05E72         3 GKHGKYVYVKRG-DGWYVKVRVF------KNRPQ------DSPERYLIVGPKRREAPITFQVLEEDELPEEVRRALYL 67  Aeropyrum pernix
WP_011821256   3 GKHGKYAYVLRN-DGWYVKVRVL------KSREE------NDPARYIVVGPKRKDVPPTYPVLREDDVPEEVKKQLYT 67  Hyperthermus buty...
KSW12683       3 GKHGKYAYVLRS-DGWYVKVRVL------KSRKE------DDASKYIVVGPKRRDVPPSFPVIREDEVPEEVRRQVYE 67 
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