1S3A


Conserved Protein Domain Family
L51_S25_CI-B8
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smart00916: L51_S25_CI-B8 
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Mitochondrial ribosomal protein L51 / S25 / CI-B8 domain
Proteins containing this domain are located in the mitochondrion and include ribosomal protein L51, and S25. This domain is also found in mitochondrial NADH-ubiquinone oxidoreductase B8 subunit (CI-B8) . It is not known whether all members of this family form part of the NADH-ubiquinone oxidoreductase and whether they are also all ribosomal proteins.
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Statistics
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PSSM-Id: 197984
Aligned: 62 rows
Threshold Bit Score: 52.1359
Created: 12-Jul-2011
Updated: 2-Oct-2020
Structure
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Program:
Drawing:
Aligned Rows:
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Sequence Alignment
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Format: Row Display: Color Bits: Type Selection: 
1S3A_A        31 PGSQGVRDFIEKRYVELKKANPDLPILIRE---------------------------------CSDVqP-K--LWARY-- 72  human
CBZ36560      22 N--PAMRQFMATYLPEFNRQYPQVKIDIRP---------------------------------RQWPeS-S--ITGIY-- 61  Leishmania dono...
NP_984745     42 NGHMGARKLWREHLPTLQFYNPGLDIQVHRvan----------------------------sdKKQPvP-Cv-LEVLG-- 89  Ashbya gossypii...
NP_012754     43 NGHMGARVFWHNYLPTLQFYNPRMKFDVIRikn----------------------------edKQKSvPcK--LEILS-- 90  Saccharomyces c...
XP_461186     56 GSAIGLKKFWRNNLPTLKFHNEDVNFVLTRints--------------------------tkeDISKcP-S--KIVVY-- 104 Debaryomyces ha...
XP_629518     45 GGLSAPRIFKYKFLEPIIFWNKDVHFEYQK---------------------------------KFDTeP-R--VLVEN-- 86  Dictyostelium d...
XP_001384973  57 GPAVGLKKFWRQNLPTLKFHNDDIQFSLTRiqae--------------------------taaEVAAcPsK--IVVHS-- 106 Pichia stipitis...
XP_505543     38 GNRSQTKLFWTHSLPTLQFWNPSVAMSVSRvqa----------------------------pkEKSVgP-T--VTITR-- 84  Yarrowia lipoly...
XP_751140     52 GGHQGARHFWRNCLPRLKYYNPGVRMTVKQt-------------------------------dEQEGpA-A--LTIYFae 97  Aspergillus fum...
XP_571030     36 NSGAGPRQFLRHHAPALAYANPLLPIAIRRipdprskhkdpsspdreavklgrwggvadglqlGKGNvP-GgeMVVEF-- 112 Cryptococcus ne...

1S3A_A        73 -------AFGQET-N---------------VPLNNFSADQVTRALENVLSG 100 human
CBZ36560      62 -------RDGSEK-A---------------YSIRFLSSMGINVRFHRLVNE 89  Leishmania donovani BPK282A1
NP_984745     90 -------HDGNVL-Hr--------------LDMAHKHSDTIIDELLSTVEH 118 Ashbya gossypii ATCC 10895
NP_012754     91 -------HEGSVV-Et--------------IDMRNKMHEDIMKDLLDKIEH 119 Saccharomyces cerevisiae S288c
XP_461186    105 -------DNADKKyE---------------IDCADRHTSDILAEVIKVTEA 133 Debaryomyces hansenii CBS767
XP_629518     87 -------LNGSEH-T---------------IPINSKNADQILEEILRATNG 114 Dictyostelium discoideum AX4
XP_001384973 107 -------VDPASKiE---------------IDCKGKHSSVILNELVEATKA 135 Pichia stipitis CBS 6054
XP_505543     85 -------TDGSEE-T---------------ISIASMFWEKMAETIAEAAGA 112 Yarrowia lipolytica CLIB122
XP_751140     98 qaskaaaLNASKV-EdkyapapsetektavIDLKNLDYKEIWNKVKMMTGA 147 Aspergillus fumigatus Af293
XP_571030    113 -------HNAPAQ-T---------------LPLAHLSGQQILDQLLAIALE 140 Cryptococcus neoformans var. neoformans JEC21
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