Conserved Protein Domain Family
RRP36

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pfam06102: RRP36 
rRNA biogenesis protein RRP36
RRP36 is involved in the early processing steps of the pre-rRNA.
Statistics
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PSSM-Id: 461829
Aligned: 159 rows
Threshold Bit Score: 63.7305
Created: 22-Mar-2022
Updated: 17-Oct-2022
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
XP_001462941              14 KRprrTTSSRGAKSST-NTASSVtsaV------AQR------------RiDPRFDPMFGRADKRMFEQNYGFLREAEEKe 74 
Q7PQV6                    50 NGpeeMTSKRKVPALG-MGKKD-----------KNAsltqp---rdprF-DPRQGYFSGRQFRNNYSFLNDLRQKELKK- 112 Ano...
Q4DLV7                     4 DTsdgPPPERSARVRP-KHRSALpavR------RQR------------AvDPRFSDLYGTVDQKQFEVHYKFLREQQEEe 64  Try...
Q8I247                    12 IKkskKPLVVSNRKPF-NVFEK----Kks---aKPLv-----------R-DPRFSDFSGSFNANFFRNAYKFLYDSREQ- 70  Pla...
CAQ38048                  15 IKkgqRPMVVSNRKPF-NIFEK-----------KKTakp-------ivR-DPRFSNLSGTLNPSFFKKAYKFLYEKREE- 73 
XP_001612070              52 KRsskAPVTLSNDVAY-NPYQKLkfdTkggknrMKA------------R-DPRFSDFSGTLNDDLFRKSYAFLGDMLQD- 116
Q4U8J3                    39 KRksnAPVELPNNFSF-NPYGS-----------NKLskksgkgkkmvtR-DPRFSELSGKLNVDMFRRSYSFLEDMRKE- 104 The...
Q4N193                    39 KKrsnTPVELPNNVSF-NPYRS-----------NKFskkpgkgnkmlvR-DPRFSEHSGKLNLDMFRRSYSFLEEMRKE- 104 The...
XP_001309958              13 KKsrnAPQELSTSKPCgRKLLDTeesH------KIT--------------DPRFREECGEIDKVGFVKNYAFLQKNREQ- 71 
WGS:AAFB:cds.EHI_007980A   1 MGkndAPMEVSAKKKV-SRTIEIfkpK------KIE------------RrDPRFTEEGGKVSMLGFCKKYKFLEEKQKE- 60 
XP_001462941              75 eaerrfrikclrcvirrcELEEAGEDLD-----EYDlsdyeqevfgedhqrelremkltpPQRLyaelEQLQRASQLYVS 149
Q7PQV6                   113 ------------------LNNKLEAATDp----EEA------------------------SKIK----FLIQRTENQIRE 142 Ano...
Q4DLV7                    65 ethrrnrirrlkciarrgELEASGADLE-----EYDlseterevfgedhldelsamkllpLQEVqrelQQLQRESQLHVS 139 Try...
Q8I247                    71 ------------------EKKIIEKKLKs---kNITq------------------------EEK----DELKKKYNDYKS 101 Pla...
CAQ38048                  74 ------------------EKGIIEQKLK-----GKKl----------------------tQEER----QDLKNKLNTYKD 104
XP_001612070             117 ------------------EVKEIKSALR-----VSQragvnsikta----nalrniahmnISSL----SDAKRALDRYTT 165
Q4U8J3                   105 ------------------EVKDIMQAIK-----INKkfgtdslkgi----esmkkishlnISNI----EEAKRALDRYKA 153 The...
Q4N193                   105 ------------------EVKEITRAIK-----INKkfgteslkgi----esmkkishlnISNL----DEAKRALDRYKS 153 The...
XP_001309958              72 ------------------EISQMQKELEddptlADD--------------------------------PEFKKRLQSLKD 101
WGS:AAFB:cds.EHI_007980A  61 ------------------EANELSKQIKn----CKD------------------------AQER----EKLIKKRQQLNQ 90 
XP_001462941             150 KTRDASVKDRRSSVKQELLRKev--vaVKAGRKarPYFPKRAEVKRAM--TADTFSRLNd----------KGGkaAVDRY 215
Q7PQV6                   143 YAKHKALDADRMREKQQARAAiq--egKRPFFE--RKSTKQARALVEQ--YDKLKDHGA-----------LDK--HIDKR 203 Ano...
Q4DLV7                   140 RTKGRHVQSRRDTLRKEIIKRea--laVKEGKKqrPFIPKRAHLKREI--LADTFERLEr----------KGGkgAVEKY 205 Try...
Q8I247                   102 TDILLKKKEEERKLKAELVKQekq-niLTKNKK--PYYYSDRKIKKIV--Q----EKL------------SSY--KSLKK 158 Pla...
CAQ38048                 105 TERVLQRKEEERKLKQKLVTEekk-niLHKNKQ--PFYYSQRKIKKMVneQMANKGSI--------------------KK 161
XP_001612070             166 QQKQLKSDQALRDLKKDLITEekq-kiATTSKT--PFYYSTKKVKKML--RDKERDAIEaalqssainadGAG--KIHKK 238
Q4U8J3                   154 ENAHLEKKDELRKLKKSLVKEemdkiaLT-GKK--PYYFTDKKVKKIY--KEINKKKIEesmkstainygPNK--AIHKK 226 The...
Q4N193                   154 ENAHLQKKEELRKLKKSLVQEeknkisLT-GKK--PYYFSDKKVKKIY--KEMNKKKIEeslksteinygPNK--AIHKK 226 The...
XP_001309958             102 QHKTMASKIDDVNASIQWHREer--qrIAEGKR--PFWMGKQDMKLMQ--QKKKFDELQ-----------STG--RLNAY 162
WGS:AAFB:cds.EHI_007980A  91 RITMQKKYKNEEIIKRGLVEEnh--krIIEGKQ--PKFLSKQELKEEV--DKQTYGD------------------QLKKV 146
XP_001462941             216 VIRKRKK 222
Q7PQV6                   204 RKKISAK 210 Anopheles gambiae str. PEST
Q4DLV7                   206 VGRKSRR 212 Trypanosoma cruzi
Q8I247                   159 VIKKEKK 165 Plasmodium falciparum 3D7
CAQ38048                 162 AVKKEKR 168
XP_001612070             239 VSKESRR 245
Q4U8J3                   227 LESQSRR 233 Theileria annulata
Q4N193                   227 LESQSRR 233 Theileria parva
XP_001309958             163 LKKRNKK 169
WGS:AAFB:cds.EHI_007980A 147 EEKRIKR 153
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