6IR9


Conserved Protein Domain Family
Elf1

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pfam05129: Elf1 
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Transcription elongation factor Elf1 like
This family of short proteins contains a putative zinc binding domain with four conserved cysteines. Swiss:P36053 has been identified as a transcription elongation factor in Saccharomyces cerevisiae.
Statistics
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PSSM-Id: 461556
Aligned: 136 rows
Threshold Bit Score: 54.8683
Created: 22-Mar-2022
Updated: 17-Oct-2022
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
6IR9_M              5 GKRKSsarKPA---PKIKQK-LETQFTCLFCNHDnS-VVCTLDKKNS---IGLLECKKCNLSFQAP-INSLSQPIDIYSD 75  Komagatael...
Q8ZTX4              2 GRRRR---RRKv--ILKPKRtLPKIFTCPHCGAQ----LVSVKKTGN---GYLVICGNCGLRYEFE-ERQGWMPVDYYNA 68  Pyrobaculu...
jgi:Cmaq_0929      27 GKRRK---TRKl--LVRPKKrLPTVFQCPYCGSV-A-VNVSVIKKEN---KVKVTCGVCGLEAVFD-KVNGLLPVDYYNK 95 
jgi:Vdis_0767       2 GRRRK---SRKk-lLLKPKKtLPKIFTCPHCGAP-L-VNVKIDRKEG---KVLVNCGNCGLEAEFN-YIPGLLPVDYFNK 71 
CBRAS:FFONT_0863    4 GRRKR---KRQq--LKKPVRkIPKIFVCPHCSKEsLrIVIRPKQGEDk-aIAEASCGECGFCARFY-VPNIFEPVNAYGK 76 
Q4JAS4              2 GGRKK---RRKlqlQRPKPK-IPSVFECPRCGKV-T-ISITVKEG-----IAKVMCGNCKLEDQFD-VPLVYDEANAYGK 69  Sulfolobus...
WP_052846259        2 GGRRK---RRKqllLRPKPK-IPNTFECPRCGKV-A-ITVEIKNG-----IAKIKCGNCGLEDQFE-VPPIFDEANAYGK 69  Sulfurisph...
RogerUC:Ahos_0787   3 GKRKK---RTKi--IKPKPK-LPKTFECPRCGRI-A-ISVEIKNG-----IAHIKCGNCGLSADIE-VPPVFDEANAYGK 68 
Q980N0              3 GKRRK---RTKi--IRVKPK-LPKTFECPRCGKV-S-VSVKIKDN-----IATITCGSCGLYTEVE-VPPVFDEANAYSK 68  Saccharolo...
jgi:Msed_2290       3 GKRKK---RTKi--VRVKPQ-IPKTFECPRCGKI-A-ITIKFDKSDSgprTAHIKCGSCGLSTDLEgLPPVYDEANVYGK 74 
6IR9_M             76 WIDACE 81  Komagataella phaffii GS115
Q8ZTX4             69 FVDLYL 74  Pyrobaculum aerophilum
jgi:Cmaq_0929      96 FVDKYF 101
jgi:Vdis_0767      72 FVDLYY 77 
CBRAS:FFONT_0863   77 VIDLYD 82 
Q4JAS4             70 FIDRYY 75  Sulfolobus acidocaldarius
WP_052846259       70 FIDRYF 75  Sulfurisphaera tokodaii
RogerUC:Ahos_0787  69 FIDLYL 74 
Q980N0             69 FIDMYL 74  Saccharolobus solfataricus
jgi:Msed_2290      75 FLDLYL 80 
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