1IRU


Conserved Protein Domain Family
proteasome_beta_type_3

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cd03759: proteasome_beta_type_3 
Click on image for an interactive view with Cn3D
proteasome beta type-3 subunit. The 20S proteasome, multisubunit proteolytic complex, is the central enzyme of nonlysosomal protein degradation in both the cytosol and nucleus. It is composed of 28 subunits arranged as four homoheptameric rings that stack on top of one another forming an elongated alpha-beta-beta-alpha cylinder with a central cavity. The proteasome alpha and beta subunits are members of the N-terminal nucleophile (Ntn)-hydrolase superfamily. Their N-terminal threonine residues are exposed as a nucleophile in peptide bond hydrolysis. Mammals have 7 alpha and 7 beta proteasome subunits while archaea have one of each.
Statistics
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PSSM-Id: 239728
Aligned: 25 rows
Threshold Bit Score: 268.342
Created: 26-Apr-2006
Updated: 2-Oct-2020
Structure
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Program:
Drawing:
Aligned Rows:
 
active sitebeta subunit
Conserved site includes 8 residues -Click on image for an interactive view with Cn3D
Feature 1:active site [active site]
Evidence:

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1        #               # #              #                                           
1IRU_X      6 YNGGAVMAMKGKNCVAIAADRRFGIQA-QLVTTDFQKIFPMGdRLYIGLAGLATDVQTVAQRLKFRLNLYELKEGRQIKP 84  cattle
Q9N9W8      7 YNGSALIGIKGXDCVALAADKRLGCSYqTLTIGNEERIFRLSqSCLLGLAGLQTDVLTTYRQIRMKSNLYHLQEDREIRP 86  Giardia intestinalis
NP_584561   7 FYGGSILAMASSKGVAIMCDKRLGMSS-ITVSKDFTRIHRIGpRLYVGLPAFVPDTQVLLRKIRKNYNLFRLEHQREMEP 85  Encephalitozoon cu...
AAO14683    7 YNGSAIVAMAGDGCVGIASDTRYGVRQlQTVGCQRQKTFQLTdQTFVGIAGLATDVQTMAQLLDFRIKLFSLREERTMQP 86  Pyrocystis lunula
AAK06878    6 YNGSAVVAMVGKNCFAIASDRRLGVQL-QTIATDFQRISKIHdRVFIGLSGLATDVQTLYQRLVFRHKLYQLREERDMKP 84  thale cress
AAT09074    6 YNGSAIVAMVGKDCVAIASDMRYGIQQ-QTIACDMKKVFQMGdKLFIGLSGLLTDVQTLKQKFDFKLKMYSLRENRPMRP 84  Bigelowiella natans
XP_646265   6 YNGGACIVMVGKNCVAIASDLRFGIQQ-QTISNDFPKVYRINdKCFVGISGLVTDAQTLYQKLVFRHNLYKLREERDMSP 84  Dictyostelium disc...
XP_764253   7 YNGGAVVAMMGEGCVAIACDKRLGLNQqVTVSSNFPKAFKVTeSCFFAASGLATDVQTLKEEIMFKVNMYKLRGDKEMSV 86  Theileria parva st...
XP_626290   5 YNGGAILAMKGKECVAFATDMRLGSNGyRTISTDFDKVIRPSsKTLMGFSGLATDIHTLTNLIKFKTNLYHLREEREIGV 84  Cryptosporidium pa...
EAS01100    7 YNGGSMLAMKGEQCVAIGADRRLGAQF-QTVATNFQKVFRIQdNILLGLTGLATDVQTFHRLIQYKVNLYRLRENKDMKV 85  Tetrahymena thermo...
Feature 1                                                                #                    
1IRU_X     85 YTLMSMVANLLYEKRFGPYYTEPVIAGLDpk---tfKPFICSLDLIGCPMVTddFVVSGTCAEQMYGMCESLWEPNMDPD 161 cattle
Q9N9W8     87 RATAKMISSFLYKHRFGPYFISPIIAGFEad----gKPYLGAMDTIGCLDDCtnFQIAGTASDFLLGLCETHVKPDMSED 162 Giardia intestinalis
NP_584561  86 EELSSMISFLLYSKRETPYITAPIVAGLTsd----gKPYISGMDCIGSIASPgdFVAVGTADKNLMGICEALYRPDMDEE 161 Encephalitozoon cu...
AAO14683   87 QTVGNLISSILYEKRFGPYFTEPVVAGLDkd----hNPFLCAFDFIGAMSKAqdFVVSGTSSEQLFGVCESFWRPKMNKD 162 Pyrocystis lunula
AAK06878   85 ETFASLVSAILYEKRFGPYLCQPVIAGLGdd----dKPFICTMDSIGAKELAkdFVVSGTASESLYGACEAMYKPDMEAE 160 thale cress
AAT09074   85 KVFSSLVSSTLYEKRFGPYFVEPVVAGLDak----eGPFIAAMDLIGAPVFAkdFVVSGTTSDELYGVCEAFWKPNMGPD 160 Bigelowiella natans
XP_646265  85 RVVSNLLTNMLYEKRFGPYFTEPLICGLEgp---dnTPFISGMDLIGASVATddFLVVGTMTPAMYGVCETLYKKDMNED 161 Dictyostelium disc...
XP_764253  87 KTLSNMVGAMLYSRRFGPWFVDSVIAGLDnd----sSPYITCFDLVGAPCTPsdFVVAGTCSEQLYGVCEALFKPGMDPE 162 Theileria parva st...
XP_626290  85 KALSHMTASILYSKRFSPYFVEPIVAGLDnn----nVPFIAGYDLIGCLSVCseFAISGTADNQLFGICESYYRPDLEPD 160 Cryptosporidium pa...
EAS01100   86 NTFVNLISATLYEKRWGPYFVSPIVAGLEydevkgvIPITATYDSIGCTSIEgeFQVGGTGADGLIGSCESFWRKGLKPD 165 Tetrahymena thermo...
Feature 1                     #  ##                   
1IRU_X    162 HLFETISQAMLNAVDRDAVSGMGVIVHIIEKDKITTRTLK 201 cattle
Q9N9W8    163 EILPLMEQIIRSATNRDAYSGWGAHVVVLRRDGTTSDIPI 202 Giardia intestinalis
NP_584561 162 NLFVTCVQAFLNAIDRDALSGWGADCYVIGKNKVTKRSIK 201 Encephalitozoon cuniculi
AAO14683  163 ELFETLAQCLLSAVDRDCLALHDLAFSAVPRAGRCVSCLS 202 Pyrocystis lunula
AAK06878  161 ELFETISQALLSSVDRDCLSGWGGHVYIVTPTEIKERILK 200 thale cress
AAT09074  161 ELFETISQSLLAAVDRDCLAGWGAIVHVITKDGVTTKQLK 200 Bigelowiella natans
XP_646265 162 DLFETISQCMLASLDRDALSGWGAIVHVITPTQVITKKLL 201 Dictyostelium discoideum AX4
XP_764253 163 QLFETVSQCLMAGIDRDCLSGWGAEVHVITPDRVISRSLK 202 Theileria parva strain Muguga
XP_626290 161 ELMEIVSQCMLSGIDRDAFSGWGCKVYLLTPEKLVTKTLK 200 Cryptosporidium parvum Iowa II
EAS01100  166 ELEDIVAQSLSAGCDRDILSGWGGVVYTLTKDNLSVKVLK 205 Tetrahymena thermophila SB210

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