5ECQ,4EQ4


Conserved Protein Domain Family
GH3

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pfam03321: GH3 
GH3 auxin-responsive promoter
Statistics
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PSSM-Id: 460885
Aligned: 146 rows
Threshold Bit Score: 297.203
Created: 21-Mar-2022
Updated: 17-Oct-2022
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
5ECQ_D            16 EFDEMTRNAHQVQKQTLKEILLKNQSAIYLQNCglNgnatDPEeA--------FKSMVPLVTDVELEPYIKRMVDGdtSP 87  thale cress
WP_013627971      28 RFEKTMNRAADQQQQWLLKRIRKCEETQFGIDHgfs---niHTvAd-------FQRQIPVSDYTYFAPYIDEVAAG--NT 95  Rubinisphae...
Q7UIB5            23 rYLADAERARDIQRENLLHRIHQNADTAFGRDHgfs---eiRTlEd-------FRRRVPIAGYEAARPYVDRVIQG--ET 90  Pirellula sp.
jgi:Sinac_6215    23 qFLSQTSCADEVQRDLLMSRIARHADSQFGRDHhfh---eiRTpAd-------FRRRVPIRGYDAMEPYIDRVRQG--DL 90 
WP_013563397      22 rFLDDTKRADQVQRRVLARLLERDAASDFARRHglt---taRDlEt-------YRRRVPIRDYDGHEPDFARVRQG--DL 89  Isosphaera ...
WP_012806395      38 sniksKSKIRKTQVKILLEILKTNKNTEYLKNFete--sqILNaEnekeliekFQNKIPIVNYEDIKEFVEKEKSG--EN 113 Leptotrichi...
CCU73758          26 kMLESSKQLESIQRAKLQATLTLVAGSASGKQHnvs---adMSlEe-------FQQRIPVTDYDHWHDMIVEQQKS--NS 93 
Q6F6L5            26 RFQKQKNALQQVQREKLQQILKISTLAQAA-----G----VTDyEq-------FRQQFPVTRYTHWRDRIHECRA---QQ 86  Acinetobact...
jgi:Riv7116_5955  18 KFYQALENPQIAQQKVQNEIFKSLMKSDYGRYLrvk------siDd--------WHKIPIVEYQNIENWIHTQQQD--KT 81 
WP_014356969      38 SFYFMENNPEYTQKSVLQDILKSAENSEFGQKMgfs---eiSTiEr-------FKEKLPISNYSDLEAEIEKLKAG--KK 105 Acetobacter...
5ECQ_D            88 -IL--TGHPVPAISLSSGTSqGRPKFIPFTDE------LMEN-TLQL-FRTAFAFR---------NRDFpidDNGKALQF 147 thale cress
WP_013627971      96 qALvpATEKLLRFTITTGSS-GAPKLNPVTDT------WLKE-YKq--AWGIWGLknf----vdhPRHV---G-LKMLQM 157 Rubinisphae...
Q7UIB5            91 tALfpENTKVVMFATTSGTT-DHPKMIPVTED------FYRQ-YKa--GWQYWGTgvy----rdyPHLL---Q-MKSLQF 152 Pirellula sp.
jgi:Sinac_6215    91 gALfgSGTKVLMFAMTSGTT-NRPKTIPVTQE------SLAD-YRe--GWTIWGIlaf----dahPRILs-rGLLPILQI 155
WP_013563397      90 tALfgPGVEVLMFAKTSGTT-AIPKTIPVTRE------SLDA-YRa--GWKIWGIqaf----dahPDMLs-qGLKPILQI 154 Isosphaera ...
WP_012806395     114 nVL--LSDKIKLFELTSGST-SNVKYIPYTEK------FLKS-YMNGvFAWIYNLYqnnkrlflgSSYW-------SVSP 176 Leptotrichi...
CCU73758          94 pML--TSEGCERYQPTSGST-SKIKWIPYTQA------FLNE-LDGAiSPWMSDLYssfpgikkgRHYW----------- 152
Q6F6L5            87 sTL--SNSKLVRYQPTSGSS-EQIKFIPYTQA------FLDE-LDAAiAPWLSSMYrkcstlgqgTHYW----------- 145 Acinetobact...
jgi:Riv7116_5955  82 hLL--SSERVIFYEKTSGSS-GAAKSIPYTKS------LRHS-FNKMfCVWAHDLIkngpnfttgKIYF-------CISP 144
WP_014356969     106 dVL--FNGATASFIATSGST-GVPKLIPESKNgeiikgLVSQiRAILlLMLAPEVMe---------------pQKKILAI 167 Acetobacter...
5ECQ_D           148 IFSSKQYI-STGGVPVG--TA-TTNVYRNPNFkAGMKsit---spSCSPD--EVI--FSPDVHQALYCHLLSGILFRDQV 216 thale cress
WP_013627971     158 AGTWEMGK-TTGGYSIS--MV-SALLARIQNPlLRPF--------YAIPS--ELN--DVKDPVSRYYAALRLSI-LEP-I 219 Rubinisphae...
Q7UIB5           153 SSHWNVTQ-TPSGAPCG--NI-SGLAAETRPFyIGSL--------FVLPA--CVI--QITEHLAKHYTALRLSL-ACDRV 215 Pirellula sp.
jgi:Sinac_6215   156 ASDWRESV-TPSGIPCG--AI-TGLTAHMQNPlIRLT--------YCMPA--IAS--RIKDIESKYYVALRLSV-FRN-L 217
WP_013563397     155 AGDWRESF-TPSGLPCG--AI-TGLTARMQSPlVRLA--------YCLHP--SVG--RVKDVDTKYYLALRSAL-PRD-L 216 Isosphaera ...
WP_012806395     177 ILKREAV--TSGGIRVGieDD-TSYFDKVSAFfLNKL--------FTVPK--KIK--SIQNMEDFLLITAVFLL-LSENL 240 Leptotrichi...
CCU73758         153 ---------SLSWVPSDlrNQ-VSESINDDLKlLPWWkrifmartMAVP---EAV--SLAESSEESFFATSCYLASCTDL 217
Q6F6L5           146 ---------SVSWLPESqrEVlKNENLNDDSAlLGVGkrllskftQTVP---SDV--SFAAHADDALFATLCYLVADQDL 211 Acinetobact...
jgi:Riv7116_5955 145 QLGEEKVElEKSSLS-------QSQSLQDDSDyLDGWlkflignfLVSPPglNKL-----NDVEKFKHQLAKTLLKSDKL 212
WP_014356969     168 ANPSEYGK-TVGGIPIG--SA-SGQAAKDLPAeLKKK--------MVLPV--EMMlaKDLGNEATDYLTIRYALEEKQLV 233 Acetobacter...
5ECQ_D           217 QYVFAVFAH--GLVHAFRTFEQVWEEIVTDIKDGVL-S-NRI---TVPSVRTAMSK-LL--TP--------NP-----EL 273 thale cress
WP_013627971     220 GWIILMNPG--TLIRLAEIGDENKEQLIRDIHDGGL-S-DHMd--VPQEIRTKLAKrLS--VA--------NP-----AG 278 Rubinisphae...
Q7UIB5           216 GKIVTANPS--TLVEVAKFADTMKETLIRDIHDGTL-T-Gdq--pIPDAIRQQLRSrL---RP--------NP-----RR 273 Pirellula sp.
jgi:Sinac_6215   218 GTTIAANPS--TILAIARLGDREKATLIRDLADGTI-D-PKWd--LPVEVREALRRkVG--RK--------HK-----QA 276
WP_013563397     217 GTIIAANPA--TVLGIVKLAERDAATLLRDLYDGTV-A-PRFreaIPPETQRALSWsLS--RK--------HR-----GL 277 Isosphaera ...
WP_012806395     241 AMISVWSPS--FLMILLDFIEKNHKVICQIVKSEDLgT-EFF--------------------A--------DKnlgnkKY 289 Leptotrichi...
CCU73758         218 SFISVWSPT--FAMSILQLMQEHRAAIAEVLRTGEWvEpFKTltyLEAPKNLEAAKiMAawDG---------------EI 280
Q6F6L5           212 AMISVWSPT--FALQLLEKLTEQSHEIALVLETGQW------------QTRAASLKgVK--APyn------------sAR 263 Acinetobact...
jgi:Riv7116_5955 213 EIISIWSPT--FLKVILDYIQQHRKQLALELKNVMS-----------------ARRrLMllQPhlfkqvsaNP-----KL 268
WP_014356969     234 GVVCSNIAHfnILLKKMKTF---AGDLLDDIENGQI-S-SKIa--ISETLREQLTAkLR---P--------NP-----QR 290 Acetobacter...
5ECQ_D           274 AETIRTKCms---lsN-------------W-YGLIPA------------------------------------------L 294 thale cress
WP_013627971     279 ARKLEEIVnr------------------sGr-LLPRD------------------------------------------Y 297 Rubinisphae...
Q7UIB5           274 ARQLQQIVdr------------------tGh-LYPKD------------------------------------------A 292 Pirellula sp.
jgi:Sinac_6215   277 ARRLEAIVnq------------------tGr-LLPKD------------------------------------------Y 295
WP_013563397     278 VRRLESLLer------------------hGr-LRPID------------------------------------------Y 296 Isosphaera ...
WP_012806395     290 FQIIQKKYrk---lwKknrskflinyfneHeKNILSKndktqnleitkknneneiiaenknletksgnkivenfvdysvI 366 Leptotrichi...
CCU73758         281 SPKITKA------------------------------------------------------------------------L 288
Q6F6L5           264 ASLLRQLMkkdtl--------------------------------------------------------------dyqqL 281 Acinetobact...
jgi:Riv7116_5955 269 NELLQRINsnkipwhL---------------------------------------------------------------L 285
WP_014356969     291 ANELRVIYd-------------------tHkQLDVAS------------------------------------------I 309 Acetobacter...
5ECQ_D           295 FPNAKYVYGIMTGSMEPYVPKL-RHYAGD-----LPLVSHDYGSSEGWIAANV---TPRLSPeEATFAVIPNLGYFEFLP 365 thale cress
WP_013627971     298 WPN-PVIACWLGGTAGYQSRYV-RDYFGD-----SPLRDMGLVSSEGRHTIPI---ADDVPE----GVPSLVSGFYEYVP 363 Rubinisphae...
Q7UIB5           293 WPDLTLLAVWTGGSVGLYLNQL-PEYYGD-----AAIRDHGLSASEGRMTVPL---QNGSPS----GMLDYSSHHFEFIP 359 Pirellula sp.
jgi:Sinac_6215   296 WPDLCFLANWTGGTMGAYLRNY-PEYFGD-----RPVRDVGLIASEGRMTIPI---EDGTPA----GVLDIRHHYFEFIP 362
WP_013563397     297 WPHLQFLANWTGGTMGAYLRDY-PDWFGP-----KPVRDVGLIASEGRMTIPI---EDHTAA----GILDFIHHHFEFLP 363 Isosphaera ...
WP_012806395     367 WKKLSLVSCWADSDSYEIFIKLkEKLNFDkkninLKFQGKGLMSTECIVSFPL---ENVQNGsVAAYT----SFFYEFIQ 439 Leptotrichi...
CCU73758         289 WPNLALISSWDTSSSKGWAEKL-HAIFPH-----SGFQGKGLWATEGVVTFPI----------GDKYPLSLNSHFYEFED 352
Q6F6L5           282 WPKLSLVSSWDTAGSKQWAQLL-QSELPF-----AQFEGKGLWATEGVVTIPY----------DDLYPLAYHSHFYEFEY 345 Acinetobact...
jgi:Riv7116_5955 286 WSELKLISCWDSTNAADGADFL-RSLFPN-----VLVQGKGLLATEAPMTIPL--------IpAKGCVPLLNEVFFEFLD 351
WP_014356969     310 WPEFSVISCWMSASAANIVTDI-KKNLPNh----VKFLEWGYGASEGKFNIPDragNPAGLPaLFGY-------FFEFLP 377 Acetobacter...
5ECQ_D           366 V----SetGe------GEEKPVGLTQVKIGEEYEVVITNYAGLYRYRLGDVVKVIGFYNNTPQLKFICRRNlILSINIDK 435 thale cress
WP_013627971     364 Vhe---ieS-------PDPTVLQGHELLEGQEYYLLMTTSAGYYRFNIGDIVRCNGFVGQAPLLEFTQKGTrVGDLEGEK 433 Rubinisphae...
Q7UIB5           360 Ese---rdS-------KTPHVLEAWELTEGENYFIVLTTASGLYRYDIHDLVRCDGFCGQTPMLSFLNKGKnFCSFTGEK 429 Pirellula sp.
jgi:Sinac_6215   363 Edq---anH-------EAPETVEAHELIEGQRYFILPTTAGGLYRYQIHDLIRCVGFHGKAPVIEFLNKGAhFSSLTGEK 432
WP_013563397     364 Eet---veRagtvhdlAQADTLEAHELVEGRRYFLLMTTAGGLRRYHIQDVVRCVGFVGKAPLLEFLNKGAhVSSLTGEK 440 Isosphaera ...
WP_012806395     440 VsddkLe----------nRSPKLLDELELGERYCVVVTTNAGLYRYNTNDIVEVAGFYHKIPIVKFVGRINnFSDIVGEK 509 Leptotrichi...
CCU73758         353 LetqeI---------------LTAWQLKEGQRVRPILTTGNGLLRYATKDQLLVTGFINQCPCLQFISRIDg-VDMVGEK 416
Q6F6L5           346 LagehQ------------GDIIPSWQLKLNDLVSPVLTSGNGLLRYCLDDCLRVTGFYGQVPCFEFQGRRFg-VDLVGEK 412 Acinetobact...
jgi:Riv7116_5955 352 Esg----------------fVYQLHQLKQGNTYEVIISQKGGFYRYRIGDRVRFTHSYLNTPCLEFVGRKKeVSDLVGEK 415
WP_014356969     378 Vda-------------nnQETLLAHELEPGAYYELIVTSYSGLYRYNMKDIVYVTDMNNQIPRIVFVSKSSeSLVVDELK 444 Acetobacter...
5ECQ_D           436 NTERDLQLSVE-SAAKRlsEEkIEVIDFSSYI-DVS-----------TDPGHYAIFWEISgetn--edvlQDC-CNCLDR 499 thale cress
WP_013627971     434 VTERQILEAAHeAAREL---G-LPLGLFTG-VpRRLe----------REAPRYDFLVETAdlpda--etarRF-LHTFDQ 495 Rubinisphae...
Q7UIB5           430 LSEHQVMQAMQqTLQSI---N-APSCTFTL-Ap--Tl----------GERPRYHLVLDDSslpn----lceRI-GQELQN 487 Pirellula sp.
jgi:Sinac_6215   433 LSEFQVVAAVGaAQRTL---N-LRLSSFLL-Lp--Sw----------GDPPHYNLLVEESdlvdr--ntveKL-AAEVEA 492
WP_013563397     441 LSEFQVVAAVDqTRREF---N-ARWMTYLV-Lp--Vw----------GDPPGYRLLIEADdlagadseyldRL-ARAIDH 502 Isosphaera ...
WP_012806395     510 LKNSFVEKQVLtTLEENniKG-----EFLLFApVKNe----------TGGIFYTLFLEIKkdgr--kfnwKQI-EKEINS 571 Leptotrichi...
CCU73758         417 LAPDVAVNLINeFDGK------HGIAPVTLLAlPSNef---------rAKPTYALLCSGDdkak---ahgAEL-SAQLEN 477
Q6F6L5           413 LSPEVAHKLLTrLNQQ-------HIQAISLFAvDTQq----------QAKPFYAVLVEGEa--------tSPLsVDEIDQ 467 Acinetobact...
jgi:Riv7116_5955 416 LHSEFVRDVLEtLP--------LEESCFKSLVpVKH------------PQEHYILLLDNAeh------npEEI-AMQLEE 468
WP_014356969     445 LMVYEIDRHIKkISDDL-----AEEIRFFQVLlDENekklifilepcSETFNY-----------------KSF-RETLET 501 Acetobacter...
5ECQ_D           500 AFi-DAG-YVSSRKCKTIGALELRVVAK-----GTFRKIQEHFL-G--LGSSAGQFKMPRCVKPSN 555 thale cress
WP_013627971     496 ELakLNFlWRARRKEGVLAPPHLWRLQA-----GRWEQYISAEVaR--VGTGDYQYKHPGIVLKeq 554 Rubinisphaera brasiliensis
Q7UIB5           488 QLaqVNCeYADKCASGRIEPIQVTRVPA-----GTWEKLRASKTsK---RGNFEEYKHPCLTNDPN 545 Pirellula sp.
jgi:Sinac_6215   493 ELqrLNLeYENKRSTLRLGPIRIRRIPA-----GSWSDFQKRRLaR--SGGTVEQYKQPHLMPDlg 551
WP_013563397     503 KLrhLNEeYANRLDTRRLAPLKIELIAS-----GSWTALQRRRLeR---GGTLEQYKKPCLLPdld 560 Isosphaera pallida
WP_012806395     572 SLc-KAFhYEYAYKLGQLRKVRVFLIEK-----NGLKTYTAEKS----KKQKIGDIKYRLLdknfg 627 Leptotrichia buccalis
CCU73758         478 SLc-QHFhYKLARELGQLAKAELLIVDD-----AM----DVYTShKiaGGMVAGNIKVEPLVlwqs 533
Q6F6L5           468 ALr-EHFhYELARDLGQLDQPQIFYVDN-----GW----EGYKQvVvrEGMIEGNIKPEPLKkvtl 523 Acinetobacter baylyi
jgi:Riv7116_5955 469 GLq-KSHhYRRARLLEQLETARVMISPKipeiiSLYKSK---------SGKKWGDLKHDILANQpi 524
WP_014356969     502 SLttENQvYQKLRQSRQLLPAEVIAVID-----GYRDSLFTRSIm---PGKNVNQTKLKTIVReyp 559 Acetobacterium woodii
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