Conserved Protein Domain Family
Fer2_4

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pfam13510: Fer2_4 
2Fe-2S iron-sulfur cluster binding domain
The 2Fe-2S ferredoxin family have a general core structure consisting of beta(2)-alpha-beta(2) which a beta-grasp type fold. The domain is around one hundred amino acids with four conserved cysteine residues to which the 2Fe-2S cluster is ligated. This cluster appears within sarcosine oxidase proteins.
Statistics
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PSSM-Id: 433268
Aligned: 114 rows
Threshold Bit Score: 64.8681
Created: 27-Apr-2021
Updated: 29-Sep-2021
Structure
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Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
ADE01574         41 EDPTTLSVDGTQVTVPPGSTVIDAMQAVDdevvsvdpgadsldedA-D-VPA-LCYyd---rGGDASDEIGPRSECRTCM 114  Haloferax v...
Q123J0           21 SDPVTLRFDDRTITAPAGVSIAAALLLNG----------------V-GpFRT-TPV------TSAPRAAYCMMGVCFDCL 76   Polaromonas...
jgi:Ddes_1687    10 DRQVTIYFEGQALEVEKGISVAAAVLGPS----------------H-G-WTR-TDH------EGNRRGPYCHMGVCFECL 64   Desulfovibr...
Q6AKZ9            2 SEKITIYFEGKPVTVDAGVTVAVAVLEHS----------------H-S-HNE-GNYtsinpvSGERRGPNCLMGVCFECM 62   Desulfotale...
WP_012649085     10 AAELTFSFEGHVLRARKGDTVASALLLAS----------------E-Q-VTRnTSV------SGSPRGPYCLMGVCFECL 65   Agrobacteri...
Q11H94           10 KARLSFDFEGHRLEAEDGDTVAAALLLAG----------------E-R-VLRsTAV------SASERGPFCLMGVCFECL 65   Chelativora...
Q123R1           10 ACALTFYIDGHAVAAESGETVAAVLLRQQ----------------T-P-VCRtTPV------HESPRAPYCMMGVCFDCL 65   Polaromonas...
zuci:PHZ_c2376  101 ARSVTIMVDGQALLVEEGEPLSAILLRTP----------------P-H-ISRtTPI------GGAARAPFCMMGVCFDCL 156  Phenylobact...
Q123I1           13 QKAVLIRVEGREVHAREGQTLAMALLGAG----------------VvP-FRR-TAV------SGAPRAPLCLMGVCFDCL 68   Polaromonas...
Q123K6            9 RPVVDIFVEGRRISAREGETIAAALLNAG----------------I-VpFRR-TPV------SGQPRAPLCLMGVCFECL 64   Polaromonas...
ADE01574        115 VETDEHGVVPSCSFPATDGLRVETDTS 141  Haloferax volcanii DS2
Q123J0           77 VEVDGMPSRQACLIPVREGMIVRRQQG 103  Polaromonas sp. JS666
jgi:Ddes_1687    65 MTINGVPDQQACLITVAEGMRVSRQDG 91   Desulfovibrio desulfuricans ATCC 27774
Q6AKZ9           63 VTIDGVPNQQSCLIVARDGMKVERQTH 89   Desulfotalea psychrophila
WP_012649085     66 VEINGVPNRQACMTLLEEGMAVRKQRG 92   Agrobacterium vitis
Q11H94           66 VEIDGIPNRQACMVKVLPGMRVRRQRG 92   Chelativorans sp. BNC1
Q123R1           66 AIIDGVASTQSCLVTVREGMRVERQFG 92   Polaromonas sp. JS666
zuci:PHZ_c2376  157 AEVDGEVSSRTCMIRARHGMVVRRQSG 183  Phenylobacterium zucineum HLK1
Q123I1           69 VEVDGSQNVQSCLVEVREGMQVRLPSG 95   Polaromonas sp. JS666
Q123K6           65 VEVDGAQNVQSCMVRVNAGMQVGLPTG 91   Polaromonas sp. JS666
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