5V86,5V89,4GBA


Conserved Protein Domain Family
Cullin_binding

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pfam03556: Cullin_binding (this model, PSSM-Id:427366 is obsolete and has been replaced by 460971)
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Cullin binding
This domain binds to cullins and to Rbx-1, components of an E3 ubiquitin ligase complex for neddylation. Neddylation is the process by which the C-terminal glycine of the ubiquitin-like protein Nedd8 is covalently linked to lysine residues in a protein through an isopeptide bond. The structure of this domain is composed entirely of alpha helices.
Statistics
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PSSM-Id: 427366
Aligned: 187 rows
Threshold Bit Score: 76.8498
Created: 26-Apr-2021
Updated: 29-Sep-2021
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
5V86_A       261 KLKAQI-PKMEQELKEP-GrFKDFYQFTFNFAK---NpGQ--KG--LDLEMAIAYWNLVLngrF--KFLDLWNKF-LlEH 328 Escherichia vir...
XP_001564670 125 QLRQKL-GEWVKDVRESsGaFLLMYTYMYDYIR-----GEedRR--MTRTTAINGWDVFFgq---nkRYAKWKTWaVaNL 193 Leishmania braz...
CAM71855     117 QMRQNV-TEWVKDVRESgGsFLLMYNYLYDYIR-----GEedRR--MTLTTALSAWDVFFsk---ndLYAKWKAWaVaNV 185 Leishmania infa...
Q4CTL1       116 AMRSHV-DEIDEVLHKDpDqFRKFYRFIFGWVRspeTtARslGElgMNIATAVELWQMLFpeyKtfLKMNDWITF-CtTK 193 Trypanosoma cruzi
Q38A65       115 ALRNHV-ETLDGALRGDvTkFRHFYRFIYKWVQsplTmERnmGQvgMSIETAVELWRMLFphyRefKRLDDWITFcMsKK 193 Trypanosoma brucei
XP_002504293  89 egLATLfSSLTREFavdpqrFAAFYHFFFFVAR---DrGH--RN--LADATAVEGWRFLLgggRf-aLLEPWCAF-VrER 159 Micromonas commoda
EDQ52851      70 HLQAKLlda---------rnFSVFYRFVFFMCR---DpGQ--KN--ISVSTAIAGWRLALtgrFr--LLDQWCAF-VqVH 130 Physcomitrella ...
KQK15075      62 KLMSVLeldd-------arhFSTFYDFVFFISR---EnGQ--KN--ITIQKAVAAWRIVLngrFr--LLDRWCNF-VeKY 124 stiff brome
VDC68396      71 KLMSRLdlmas----vdfseFTRFYDFVFFMCR---EnGQ--KS--ITVAKAITAWKLVLagrFr--LLNRWCDF-TeKN 136 field mustard
XP_004232218  70 KLRLNLead--------fseFSRFYDFVFFVFR---EnGQ--KN--ITISKAVTGWKIVLagrFr--LLDHWCDF-VeKK 131 tomato
5V86_A       329 Hk---Rs---IPKDTWNLLLDFS--Tmi-----aDDMSNYDEEGAWPVLIDDFVEF 371 Escherichia virus T4
XP_001564670 194 Tg---D----VSRDLWRQLGIFLtmDtdatqssdDQVLAL----SWPSAIADFIEt 238 Leishmania braziliensis MHOM/BR/75/M2904
CAM71855     186 Kg---G----VSRDLWRQLGIFFtmDttaaqrfgDQISAL----PWPSAIADFLdq 230 Leishmania infantum JPCM5
Q4CTL1       194 Ei---FhreaISRDLWEQLLEFTslT---------RYDTYDVNDAWPSAIDDFVEY 237 Trypanosoma cruzi
Q38A65       194 LfphgI----ISRDLWEQLLEFTfvT---------DYSKYDVSDAWPSAMDDFVEY 236 Trypanosoma brucei
XP_002504293 160 ReggkG----VSEDTWCQVLDFAhsCndasrgggGCLDAYDPHGAWPVLVDEFVDH 211 Micromonas commoda
EDQ52851     131 Qr--hA----VSEDTWRQVLEFSrsVh-------eDLSNYDVEGAWPVLVDEFVEN 173 Physcomitrella patens
KQK15075     125 Qr--hN----ISEDAWQQLLAFSrcVn-------eDLEGYDPKGAWPVVIDDFVEH 167 stiff brome
VDC68396     137 Qr--hN----ISEDTWQQVLAFSrcVh-------eNLEGYDSEGAWPVLIDEFVEH 179 field mustard
XP_004232218 132 Qr--yN----ISEDTWQQVLAFSraVh-------eNLEGYDREGAWPVLIDDFVEH 174 tomato
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