Conserved Protein Domain Family
ATP_synt_6_or_A

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TIGR01131: ATP_synt_6_or_A 
ATP synthase subunit 6 (eukaryotes),also subunit A (prokaryotes)
Bacterial forms should be designated ATP synthase, F0 subunit A; eukaryotic (chloroplast and mitochondrial) forms should be designated ATP synthase, F0 subunit 6. The F1/F0 ATP synthase is a multisubunit, membrane associated enzyme found in bacteria and mitochondria and chloroplast. This enzyme is principally involved in the synthesis of ATP from ADP and inorganic phosphate by coupling the energy derived from the proton electrochemical gradient across the biological membrane. A brief description of this multisubunit enzyme complex: F1 and F0 represent two major clusters of subunits. Individual subunits in each of these clusters are named differently in prokaryotes and in organelles e.g., mitochondria and chloroplast. The bacterial equivalent of subunit 6 is named subunit 'A'. It has been shown that proton is conducted though this subunit. Typically, deprotonation and reprotonation of the acidic amino acid side-chains are implicated in the process. [Energy metabolism, ATP-proton motive force interconversion]
Statistics
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PSSM-Id: 273458
Aligned: 39 rows
Threshold Bit Score: 127.322
Created: 8-Oct-2014
Updated: 25-Oct-2021
Structure
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Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
P43719     5 TTSEYISHHlSFLktgdgfwnVHIDTLFFSILAAVIFLFVFSRVGkkatTGVPGKMQCLVEIVVEWVn-GIVKENFHGPR 83  Haemophilus influen...
CAB59845   5 IFSALD----FHS--------NSFNLFLPTWLIPLGLFLMTTKT-----LWVFPSQTQTLSSSSKEYm-QMQISMTKSKS 66  Terebratulina retusa
P48893     5 LFSSLDG---------------MTSLWSWLTPMFLSVFMIWNKT-----WSMDQN--NIIKY---------LAASNWNNS 53  Albinaria caerulea
BAA89023   5 LFSSLDCG--IIG--------AMSSLL-WLLPLLMVLALSSPSS-----WFITQP--AGLKYSIN------MYSHTSMKK 60  Pupa strigosa
BAA88261   2 gCLIFEAG-------------VFCGVPFCVFFLVFLFYLISFGG-----DMWSKSFGGTFYGLISHFgmGYVFPGIG--- 60  Halocynthia roretzi
Q00224     5 VFSSFDAHS-YNL--------IWLSMPLWLLSSMVPMTVLFSDV-----HSKSGSTSSFRSLVLSFTy-SMIRLNGKGLK 69  Mytilus edulis
Q9ZL15     7 TIANFFSSN------------HDFITGFFVVLTAVLMFFISLGASrk-mQMVPMGLQNVYESIISAIl-SVAKDIIGEEL 72  Helicobacter pylori...
P27178    53 EIGNLKLHG------------QTFATSWFVIL---LLVIASLAATrn-vQRVPSGIQNLMEYVLEFLr-DLARNQLGEKE 115 Synechocystis sp. P...
P95784     7 ptvKFLGIE------------FDLTILMMSLLVVLIAFLFVFWTSrh-lKIKPTGRQNVLEWIYDFVl-GIIKPNLGSYT 72  Streptococcus mutan...
P37813     6 RTIEFLGLT------------FNLTNILMITVASVIVLLIAILTTrt-lSIRPGKAQNFMEWIVDFVr-NIIGSTMDLKT 71  Bacillus subtilis s...
P43719    84 n-VVAPLALTIFCWVFIMN-AIDLIPvdflpqfaglfgihyLRAVPTADISATLGMSICVFFLiLFYTIKSKGFKGLVKE 161 Haemophilus influen...
CAB59845  67 lpgTFSLFVPLFFSILMVN-LFGLLP---------------YVFSPTSHLVLNITLALTLWSM-FIFSSLTTNLGLFMSH 129 Terebratulina retusa
P48893    54 tynLTKSLLTIMMVLIIFNnLLGMAP---------------FTYGITTSLWVNMTLALLLWGL-ILLSGYIKSPKKSLAH 117 Albinaria caerulea
BAA89023  61 mfpLQVFLVTLMSYLILMN-LAGLIP---------------FVYGATSSLWFAGSMALLLWML-LILSGWQRSPMESAAH 123 Pupa strigosa
BAA88261  61 ------FIVFLLIMLVFLN-LFGLVP---------------MGISYTSLPSMTMGLAFIMWGG-SYIYCFSKNTLGCIAH 117 Halocynthia roretzi
Q00224    70 lsgFPLVMSGLFMMILMLN-LSGNFP---------------FFFPVSGQFVFGFSFALSIWTC-LVLSSLLCSFEQGLMS 132 Mytilus edulis
Q9ZL15    73 arKYFPLAGTIALYVFFSN-MIGIIP---------------GFESPTASWSFTLVLALIVFFY-YHFEGIRV--QGFFKY 133 Helicobacter pylori...
P27178   116 yrPWLPFIGTLFLFIFVSN-WSGALLpwklih----ipdgaELAAPTNDINTTVALALLTSLA-YFYAGLRK--KGLG-Y 186 Synechocystis sp. P...
P95784    73 k-NYSLFAFCLFLFVFVAN-NIGLLTkiqv-------kdynLWTSPTANFAVDFGLSLMVAVI-CHFEGIRK--HGLKTY 140 Streptococcus mutan...
P37813    72 gaNFLALGVTLLMYIFVSN-MLGLPFsiti-------ghelWWKSPTADPAITLTLAVMVVAL-THYYGVKM--KGLKEY 140 Bacillus subtilis s...
P43719   162 YTLHPFNHWaFIPVNFILETVTLLAKPISLAFRLFGNMYAGELIFILIAVMYSAn-----MAIAALG-----IPLHLAWA 231 Haemophilus influen...
CAB59845 130 LLPPGAPSL-INPFLVIVESISILVRPITLTIRLAANISAGHLVLSLLSSYLISas---tsSSFALL-----FTISVGYS 200 Terebratulina retusa
P48893   118 LAPSGAPLL-LLPFLILIESISIMIRPLTLTVRLVANMSAGHIILALMASVLSSnl---snTSLSLS-----YLIMVGYY 188 Albinaria caerulea
BAA89023 124 LAPSGAPAA-LLPVLVLIETVSILIRPLTLTVRLIANISAGHIVMSLIANTLVSsg---vlSMVSI------FAVNVGYE 193 Pupa strigosa
BAA88261 118 FVPVGAPVV-LCVALIQIEILSWLCRP--LGVRLMANITAGHLLLVLMGSGLFSl-----SGVFQVFg-----LVLMLLV 184 Halocynthia roretzi
Q00224   133 LVPTGCPLI-LVPFMVVVELISGMLRPLTLVLRLTLNLGAGKVILTMCSSELVVgwlnssSLITGVGgikglLMGGGVFG 211 Mytilus edulis
Q9ZL15   134 FAHFAGPVKwLAPFMFPIEIISHFSRIVSLSFRLFGNIKGDDMFLLIMLLLVPwa---vpVAPFMVL------------- 197 Helicobacter pylori...
P27178   187 FANYVQPI----PVLLPIKILEDFTKPLSLSFRLFGNILADELVVAVLVLLVPll---vpLPLMALG------------- 246 Synechocystis sp. P...
P95784   141 LKDYLEPT----AAMLPMNLLEELTNIISLSLRLYGNIYAGEVVMALLVQFADFspyatpIAFLLN----------MAWI 206 Streptococcus mutan...
P37813   141 SKDYLRPV----PFMLPMKIIEEFANTLTLGLRLYGNIFAGEILLGLLAGLATshy-sqsVALGLVGti-gaILPMLAWQ 214 Bacillus subtilis s...
P43719   232 IFHILVITLQAFIFMMLTVVYLSIAY 257 Haemophilus influenzae Rd KW20
CAB59845 201 LFEVMVSCVQAFIFALLLTLYTNDHS 226 Terebratulina retusa
P48893   189 LFEFFVCFIQAYIFTLLLSLYMNEHP 214 Albinaria caerulea
BAA89023 194 MFEVFVCFIQAYIFTLLVKLYAEEHP 219 Pupa strigosa
BAA88261 185 FLEIGVGFIQGYVYCLLLSLYVNEGL 210 Halocynthia roretzi
Q00224   212 AAEVAIACIQCYIFCVLLCLYTEDHS 237 Mytilus edulis
Q9ZL15   198 ---FFMGILQAFVFMILTYVYLAGAV 220 Helicobacter pylori J99
P27178   247 ---LFTSAIQALVFATLAGAYIHEAI 269 Synechocystis sp. PCC 6803 substr. Kazusa
P95784   207 GFSIFISGIQAYVFVLLTTTYIGKKV 232 Streptococcus mutans UA159
P37813   215 AFSLFIGAIQAFIFTMLTMVYMSHKI 240 Bacillus subtilis subsp. subtilis str. 168
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