5G5P


Conserved Protein Domain Family
DSS1_SEM1

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pfam05160: DSS1_SEM1 
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DSS1/SEM1 family
This family contains the breast cancer tumour suppressor BRCA2-interacting protein DSS1 and its homolog SEM1, both of which are short acidic proteins. DSS1 has been shown to be a conserved component of the Rae1 mediated mRNA export pathway in Schizosaccharomyces pombe.
Statistics
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PSSM-Id: 461563
Aligned: 84 rows
Threshold Bit Score: 29.8465
Created: 22-Mar-2022
Updated: 17-Oct-2022
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
5G5P_C            21 NEEINKKSLEE-DDEFEDFPID-----TWangetIKSNAVTQ--TNIWEENWDDVEVDDDFTNELKAELDR 83  baker's yeast
CBN75991           8 EKVPVAEVLEE-DDEFEEFAEA-----NW-----DETAEDQEd-LQQWQDDWDDDDMDDDFCNQLRAELEK 66 
jgi:MICPUN_57984   8 EKKEVAVDLEC-DDEFEEFGNE-----EW-----GAEEEDAEd-VNQWEEDWDDSEKSDDFTRQLRAELEK 66 
EFJ42138          22 KKEAAADLLEA-DDLFEEFGNG-----EW-----HGAKDDEG--APLWEADWEDENVADDFTARLKAELDT 79 
XP_001701229      21 PQEPVADLLEA-DDLFEEFGTS-----EW-----QATKDDES--VPMWEADWEDENVADDFTGRLKRELDG 78 
EGG21260          29 QPKEENEVIE--DDEFEEFEDNllsllMFrfdrlDVTCDDVDt-KEQWEDDWDTEHIDDEFSKQLRQEIEA 96 
EFA84824          27 QAKEEIEIIE--DDEFEEFEDNi-----------ENQNEDQDtvKAQWEDDWDTEQIDDEFSQQLRQEIET 84 
A0DYA6            14 QPQQVQKIFDEdDDDFEEFEQE-----DLev-nhDLKID-----IKQWREDWDDEDLTDEFSIQLKQELAQ 73  Paramecium tetraurelia
Q23BV9            76 LSEEVAKVLDEdDDEFEEFQQE-----DWqdiqvDEKID-----VKQWREDWDDEDINDDFNQELRKQLGV 136 Tetrahymena thermoph...
CCD79463          24 VEKIDITLLEE-DDDFEEFPAH-----ACgeghpNEE-------ATVWEDNWDDDIVDDEFTHHLRAEFQK 81 
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