5IC9


Conserved Protein Domain Family
Utp12

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pfam04003: Utp12 
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Dip2/Utp12 Family
This domain is found at the C-terminus of proteins containing WD40 repeats. These proteins are part of the U3 ribonucleoprotein the yeast protein is called Utp12 or DIP2.
Statistics
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PSSM-Id: 461125
Aligned: 375 rows
Threshold Bit Score: 44.8472
Created: 22-Mar-2022
Updated: 17-Oct-2022
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
5IC9_C    79 AETYVLN-TL-QK-IKPASLHDALLVLPf-----STIPSLLTFLNLfA-QRElNVPLTCRILFFVLKTHHKQIVASR--T 147 Chaetomium thermoph...
EEQ38141 396 PKKEVLRlCS-SN-DNEDSIKDTIRLFSqsekccDLVENLFEIVSKkVaSDPsRKSSLSIWLKWVLLAHGGYISKQEk-- 471
CCE82841 405 ADQETLNiCH-SN-DNEENIKDTVKMFSkv--ddQCLLKLFDIISFhVsNNPsKNSSLAVWLKWILLIHGRFIAEFPn-- 478
Q6BMH1   411 TEEKIIRlCS-SN-NNDDNIKETIKLFStsesssALITKLFEIISKeVaSQPsKNSALSVWLKWLLLVHGGFIAKQPd-- 486 Debaryomyces hansenii
EDK37251 390 EPEKLIHlCS-TN-NDEASIKEVVKRFSaeengsESISKLYEIVSHeVaSKPdDTAVLALWLKWILLTHGGALSKSGd-- 465
ESS33070 636 SDARLLEtVLtSTaKDKKEVNAAVGSLTp-----VQALRLLQHLVQqQqSNPaASITKGGWIEEIVKQHAVVLSQTDa-- 708
Q4N9D3    21 SDRKLVEkLL-ST-RDNATIEDTVAELTp-----PLVLSLLEYITSsViRTPnQLYSREGWINTLLRKHSAVFT--GskK 91  Theileria parva
EDO05521 133 SDKALLEsML-QT-TDIHTIEATVADMPs-----SLALSLLEFICSnViRVPnQLYGREGWINTLLRHNCAFFS--QntA 203
Q2QLN8    88 DDHASLLnCL-YN-KDHKVIVNSISLLTp-----ADAVKLLKFFILlMqSRGaVLVSLLPWLQSLLSQHMSSIVSQEs-- 158 Japanese rice
KQJ85647  84 DDRASLLsCL-NN-RDDKVIRKSISLLSp-----ADAMKLLKSLILlMqSRGsVMVCLLPWLQALLSRHMSSIVSQEs-- 154
5IC9_C   148 MrATLEKVRANLRAALRRQKDEMGFNiAALKVVSM 182 Chaetomium thermophilum var. thermophilum DSM 1495
EEQ38141 472 LeTSLASLQTSLDDGMKLMPKLLALQ-GRLQLLKS 505
CCE82841 479 QnENLRRLSEGLSDGMKLMPRLLTLK-GRLQLLQT 512
Q6BMH1   487 QhDNLKTLQTGLTEGMKLMPRLLGLQ-GRLQLLKS 520 Debaryomyces hansenii
EDK37251 466 HySDFKQLQKGLSKGMEQMPQLLALQ-GRLQLLRA 499
ESS33070 709 GrEQLVLLLLQVEERRRSESALVKVK-GRLELLLQ 742
Q4N9D3    92 GrNALIKLNKHINQRLTMNKALLKLK-GKVDSVVY 125 Theileria parva
EDO05521 204 GrATLLKLNKHIKQRLSANQALLRLK-GKVDTVVY 237
Q2QLN8   159 SlLLLNSLYHLIDARTSTFKSSLQLS-TCLDYLFS 192 Japanese rice
KQJ85647 155 SlLLLNSLYHLIDARTSTFASALEVS-TCLDYHFS 188
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