Conserved Protein Domain Family
PBC

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pfam03792: PBC (this model, PSSM-Id:427507 is obsolete and has been replaced by 461052)
PBC domain
The PBC domain is a member of the TALE (three-amino-acid loop extension) superclass of homeodomain proteins.
Statistics
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PSSM-Id: 427507
Aligned: 18 rows
Threshold Bit Score: 229.563
Created: 26-Apr-2021
Updated: 29-Sep-2021
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
XP_013977855   11 STPDVLGEQLKKTCLSSSCSA-CwndRKHALNCHRMKPALFSVLCEIKEKTVLSIHGIQE-------EG-PSNAQLMRLD 81   dog
EDV28140       16 DVSELLQQIMSINEQSLDEAQ-A---RKHALNSHRLKPTLYGVLYEIKEKTVLNIRTPSE-------ED-PPDQQLTRLD 83   Trichoplax ad...
XP_001606748   80 SLKKLLEELRKLP-QDQDVTEpGtqeKKIALNNHRLFPILRNVLCDLK-KESYGKRGQRQffadekpEN-KPNEQLIRLD 156  jewel wasp
1_pfamImport    1 DINELLQQVMSIQTQTIDSSPvSvneSKWALYNHPLMPALFNVLCEFKEKTGLSLRHTHE-------EDlQPDAQLMRLD 73  
PDM63182      719 PVSDLVQRLEMLTVLPLENN--TveqGTYRLKNHYLYSTMFSIFVDLKERTRMVVH-----------EE-DEKDPQIRLD 784  Pristionchus ...
CAP25808        6 NLAELLAEVTKITDMTLDEN--AmnsLKCQIRVNPLHRAMQSVLIDNKEKVSISPRPALC-------PV-NNQNEK-MLD 74   Caenorhabditi...
Q19503          7 SIMDLLSEVVKITDMTMDNE--AvnkLKPQIKINPFYRAVQDVLVEQKSKIDLSTKMMKD-------LE-AQENDE-RLD 75   Caenorhabditi...
2_pfamImport    1 PIQHFLDELIKISTMEPDVD--VmanLKQSMRSNPFYPVIREVLIEQKERTVLSTQMIK--------EE-LIEDEEERSN 69  
P41779          8 NLSELLDAVLKINEQTLDDNDsA---KKQELQCHPMRQALFDVLCETKEKTVLTVRNQVD-------ET-PEDPQLMRLD 76   Caenorhabditi...
XP_019959538   40 DIGDILQQIMTITDQSLDEAQ-A---RKHALNCHRMKPALFNVLCEIKEKTVLSIRGAQE-------EE-PPDPQLMRLD 107  Japanese flou...
XP_013977855   82 NMLLAEGVSRPERRGRGGSAaaanTATpgg-cpnDNSLEHSDYRAKLSQIRQIYHSELEKYEQACREFTTHVTNLLREQS 160  dog
EDV28140       84 NMLISEGIIGPDKGASAAAAaaatASAsv---hgESQIDHSDYHAKLNQIRQIYHSELEKYEQACNEFTTHVKNLLSEQS 160  Trichoplax ad...
XP_001606748  157 KMLIAEGIAEPQLDDTCATLakleASLg------PHGIGNQDYRDKLKLVKVWYHGELAKYNMHCKSFKEHVRTLLAEQC 230  jewel wasp
1_pfamImport   74 NMLIAEGVTEPNKAGGSAAArassTCQi------DSAIEHYDYRSKLATIRQWYHQELKKCERDTSVFTDHVMTLIKEQG 147 
PDM63182      785 NMLAAEGVIGPEKDLPASLN--------------NQPLDQDDYRYQLHNIRQQFEMEMSEREHHQQTFINNTRQLMKLQS 850  Pristionchus ...
CAP25808       75 NMLTAEGIVVPGCDPSHVADi----------------kREPDFNRELNSVQNDLNQEIGACHKRRAEFSETVSNVIRSQG 138  Caenorhabditi...
Q19503         76 TMLKAEGVAGPDDSLLRIQE--------------AAGTDQYEYRQQLLKVRRELENETKAFDKHCKKWCEYVEDVLQQQG 141  Caenorhabditi...
2_pfamImport   70 KMLEKEGITGPDYSISPEAI----------------GSDQDEYRQKLKLVRKSFEENMNNYAVNCRDFSENIRSILREQS 133 
P41779         77 NMLVAEGVAGPDKGGSLGSD--------------ASGGDQADYRQKLHQIRVLYNEELRKYEEACNEFTQHVRSLLKDQS 142  Caenorhabditi...
XP_019959538  108 NMLLAEGVAGPEKGGGSAAAa--aAAAatggvgaDNSAEHSDYRAKLSQIRQIYHTELEKYEQACNEFTTHVMNLLREQS 185  Japanese flou...
XP_013977855  161 RMRPVSPKEIERMVGVIHGKFNAIQMQLKQSTCEAVMTLRSRFLD 205  dog
EDV28140      161 RTRPITPKEMDRMVSIIHRKFSAIQVQLKQSTCEALMILRSRYLD 205  Trichoplax adhaerens
XP_001606748  231 ATRPISVEEAERTIDMIHRKFEAVQIVLKQQTCESVMTLRSRCLD 275  jewel wasp
1_pfamImport  148 AVRPINSKEGEKTVQIIQKKLSNIQIQLKQQTCEAVMSLRSRFLD 192 
PDM63182      851 ETRPISELDLGRVESAVRKKLVYYQIQLKQETCEQIMTLKSKFCD 895  Pristionchus pacificus
CAP25808      139 EFRPITHKDIECMSNMVSHKFQKVIECAKQRSCENVTHLKRVYMD 183  Caenorhabditis briggsae
Q19503        142 EFRPITQQSTEKFMNKMSGKFNKVCFVLKQTACEEVIQLKKRYLD 186  Caenorhabditis elegans
2_pfamImport  134 EFRPITATAIEKLLSMTGNKMNRIIKLLKHSACAAIIHLQKRYFD 178 
P41779        143 QVRPIAHKEIERMVYIIQRKFNGIQVQLKQSTCEAVMILRSRFLD 187  Caenorhabditis elegans
XP_019959538  186 RTRPISPKEIERMVSIIHRKFSSIQMQLKQSTCEAVMILRSRFLD 230  Japanese flounder
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