Conserved Protein Domain Family
Phage_XkdX
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pfam09693: Phage_XkdX (this model, PSSM-Id:401582 is obsolete and has been replaced by 430756)
Phage uncharacterized protein (Phage_XkdX)
This entry identifies a family of small (about 50 amino acid) phage proteins, found in at least 12 different phage and prophage regions of Gram-positive bacteria. In a number of these phage, the gene for this protein is found near the holin and endolysin genes.
Links
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Statistics
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PSSM-Id: 401582
Aligned: 35 rows
Threshold Bit Score: 37.5076
Created: 11-May-2020
Updated: 7-Aug-2020
Structure
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Aligned Rows:
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Sequence Alignment
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Format: Row Display: Color Bits: Type Selection: 
Q2FX71            8 FKDIKTFYVWGYYKNEQIKWYVDKGLIDKEEYALITGEKY 47  Staphylococcus aureus subsp. aureus NCTC 8325
Q2FYD5            9 FEDIKTWYQLKEYSKEDIAWYVDMEVIDKEEYAIITGEKY 48  Staphylococcus aureus subsp. aureus NCTC 8325
EHI98057          6 YGIIKEYYGLGLYAVSDLDTFVQAKWITADEKTEIIGTni 45  Clostridium sp. DL-VIII
jgi:Desru_3491    4 FERVKYYFEKRWAGVDQVRKYVQFNMITGAEFEEITGEVY 43  Desulfotomaculum ruminis DSM 2154
jgi:GYMC10_5372   6 FERLKYYYEKKWAQKSQMRQYVAFGVITSDEYEVITGEAY 45  Paenibacillus sp. Y412MC10
Q5WE57           11 FEDLKRRYEKNWCRKDQLRRFVELEALTPEEYEIITGEPF 50  Bacillus clausii KSM-K16
Q833G0            9 FDNIKQLYDWNCYTKQDLVDYVNMNCLTKEEYTKICGEPF 48  Enterococcus faecalis
BAK21827          8 aTDIKLYYDWNCYTDEDIKTYVQLGTITQDDYKMITGKPF 47  Melissococcus plutonius ATCC 35311
Q62QA9            6 lADIKQFYDWGCYTDEEMREYVKIKWITPAEYEDITGRSY 45  Bacillus licheniformis DSM 13 = ATCC 14580
Q832X9           98 YADIKAEYGLLGLTDDNMKTFVSYKRITEKQYEEITGNSY 137 Enterococcus faecalis
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