2LNL


Conserved Protein Domain Family
7tmA_CXCR1_2

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cd15178: 7tmA_CXCR1_2 
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CXC chemokine receptor types 1 and 2, member of the class A family of seven-transmembrane G protein-coupled receptors
CXCR1 and CXCR2 are closely related chemotactic receptors for a group of CXC chemokines distinguished by the presence of the amino acid motif ELR immediately adjacent to their CXC motif. Expression of CXCR1 and CXCR2 is strictly controlled in neutrophils by external stimuli such as lipopolysaccharide (LPS), tumor necrosis factor (TNF)-alpha, Toll-like receptor agonists, and nitric oxide. CXCL8 (formerly known as interleukin-8) binds with high-affinity and activates both receptors. CXCR1 also binds CXCL7 (neutrophil-activating protein-2), whereas CXCR2 non-selectively binds to all seven ELR-positive chemokines (CXCL1-7). Chemokines are principal regulators for leukocyte trafficking, recruitment, and activation. Chemokine family membership is defined on the basis of sequence homology and on the presence of variations on a conserved cysteine motif, which allows the family to further divide into four subfamilies (CC, CXC, XC, and CX3C). Chemokines interact with seven-transmembrane receptors which are typically coupled to G protein for signaling. Currently, there are ten known receptors for CC chemokines, seven for CXC chemokines, and single receptors for the XC and CX3C chemokines.
Statistics
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PSSM-Id: 341333
Aligned: 19 rows
Threshold Bit Score: 412.823
Created: 9-Dec-2008
Updated: 25-Oct-2021
Structure
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Program:
Drawing:
Aligned Rows:
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Conserved site includes 23 residues -Click on image for an interactive view with Cn3D
Feature 1:putative chemokine binding site [polypeptide binding site]
Evidence:
  • Comment:based on structures of chemokine receptors with bound ligands (chemokines, peptides, or chemical antagonists/agonists)
  • Comment:Small-molecule chemical ligands tend to bind deeper within the receptor core, compared to a peptide ligand neurotensin, which binds towards the extracellular surface of its receptor.

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1              #                                                #  #               #  ## 
2LNL_A        21 YVVIIAYALVFLLSLLGNSLVMLVILYSRVgrsvTDVYLLNLALADLLFALTLPIWAASKvngWIFGtflCKVVSLLKEV 100 human
NP_001072090  49 VTVCVFYIFVFLLAVPGNLLVGLVIGLSKQalppSDLYLLHLAIADLLLAVTLPFWATSItkgWVFGdamCKAVTILQEL 128 torafugu
CAF98209       7 LITCFFLIIIFILAIPGNLIVGWVIFTRRQmltpSDVYLFHLTIADGLMALTIPFLAAALvkgWIFGsfmCKFLPFVVEA 86  Tetraodon nigro...
BAA31458      61 IAFCVFYVLIFLMAVPGNLIVGWVIASNKHslstSDVYLFNLMLADTLLALILPFSAVSVihgWVFGdiaCKLVSLVKEV 140 common carp
AAH84427      39 YFVVVVYALVFFLNVVGNSLVVLVIYNNKLkrssTDVYLLHLAIADLLFATTLPFWAAYKasqWVFGifmCKAVSVLQEV 118 African clawed ...
P35407        48 YAVVVIYVLVTLLSLVGNSLVMLVILYNRStcsvTDVYLLNLAIADLFFALTLPVWAASKvngWIFGsflCKVFSFLQEI 127 Norway rat
XP_001514199  49 PALAALYGLVFLFNVVGNSLVALVVLHNRPhrtvTDVYLLNLAGADLLFALTLPFWAAYQvtgWLFGtvlCKLVSVLQDL 128 platypus
XP_006636758  79 SAICVVYFLIFLLAIPGNIIVALVIGYNYRflspSDIYLLHLVVADTLYALSIPFWAVSTvhgWVFGdvmCKLVSLIQEV 158 spotted gar
XP_006008393  16 LVLCIFYFLICILAIVGNSIVALVIGYNRRsmssTDTYLFHLTIADILFAATLPFWAISMvkeWLFGdfmCKLVSLIQEA 95  coelacanth
NP_001117751  49 IFLCVLHVAIFLLAVPGNLLVGLVIGFSQQsltpSDVYLFHLTVADGLLALTLPFWAANTlhgWIFGdflCKFLSLVMEA 128 rainbow trout
Feature 1                                                                               ######   
2LNL_A       101 NFYSGILLLACISVDRYLAIVHatRTLTQKR-HLVKFVCLGCWGLSMNLSLPFFLFr-QAYHPNns--sPVCYEVLGndt 176 human
NP_001072090 129 SFYSSILFLTCISVDRYMVIVRalEARKANRqMVSWGVCAAVWVVGALLSLPGLLS--SAFVPHns-sqIVCAVQYDpgs 205 torafugu
CAF98209      87 NFYTSILFLACISIDRYLVIVRanDNVRSRRrLCSWFLCLAVWALGSTLALPALFN--DTAKLEsdpqiMICSKNFDlgs 164 Tetraodon nigro...
BAA31458     141 NFYTSILFLVCISVDRYMVIVRamESRKARRrLCSGVACALVWFLGLVLSLPSFYN--EAFYESvs-gqTVCAEHFEtnh 217 common carp
AAH84427     119 NFYSGILLLACISVDRYLAIVHatEAVTQKR-HWVKFICLGIWIFSLVVSLPTLLFr-TVFKSPrd--aYVCHDSIGnen 194 African clawed ...
P35407       128 TFYSSVLLLACISMDRYLAIVHatSTLIQKR-HLVKFVCITMWFLSLVLSLPIFILrtTVKANPs---tVVCYENIGnnt 203 Norway rat
XP_001514199 129 NFYSGVLLLACISVDRYLAIVHatRSAAHQR-RWVVFVCLGLWILSFLLALPALVLr-DVFTPPns--tPVCYENMGkdt 204 platypus
XP_006636758 159 NFYSSILFLMCISIDRYLAIVWavKAHRKRRaLCSWMVCFSVWVLGTVFSFPVLFN--DAFKPVns-drIVCYEYHNpes 235 spotted gar
XP_006008393  96 NFYCSILFLACISIDRFLSIFHaaKIHTHKKlVYNQLACALIWLLGILFSVPALFK--SAFRLPpy-mkMVCYEMYGnqs 172 coelacanth
NP_001117751 129 SFYTSILFLVCISVDRYLVIVRpaKSRKGHRrACRWYACTFIWTLGGALSLPALFN--DAFTPQrg-gpTRCAEHFDlss 205 rainbow trout
Feature 1            #  ##                                                       #      #  #     
2LNL_A       177 -akwRMVLRILPHTFGFIVPLFVMLFCYGFTLRTLfka-hmGQKHRAMRVIFAVVLIFLLCWLPYNLVLLADTLMRtqvi 254 human
NP_001072090 206 adtwRLVTRILCHTLGFLIPLAIMLPCYGVTIKRLlhvrgsLQRQRAMKVIVFVVVAFLLCWTPYHLAVMTDTFFRtkiv 285 torafugu
CAF98209     165 atswRLATRLFLHIFGFFLPLVVMIACYSIVIVRLlrt-rgFQKHRAMKVIISVVVAFLLCWMPYHVTLMVDTALRtdli 243 Tetraodon nigro...
BAA31458     218 adiwRLATRITRHLLGFLFPLVVMLICYSITVERLlrt-rgFQKQRAMKVIIAVVVAFLLCWTPFHVSTIADTLLRakvv 296 common carp
AAH84427     195 tedwMIILRIGRHLVGFFIPLLIMLFCYGFTIKTLyqt-ksSQKHRAMKVIFAVVLAFLICWLPYNLTVIVDSLMRtrfi 273 African clawed ...
P35407       204 -skwRVVLRILPQTYGFLLPLLIMLFCYGFTLRTLfka-hmGQKHRAMRVIFAVVLVFLLCWLPYNIVLFTDTLMRtkli 281 Norway rat
XP_001514199 205 -arwRVILRLLQQTFGFLLPLLVMLFCYGRTLAVLfra-rmGQKHRAMRVVLAVVLVFLLCWLPYNVILVIDSLMWvkvl 282 platypus
XP_006636758 236 idqwKLGTRVLRHVLGFLLPLIVMLVCYGVTISRLlgt-rsFEKQKAMRVIVAVVIAFLLCWMPYHLSVISDTIIRsgli 314 spotted gar
XP_006008393 173 perwKVATSILRHTFGFLIPLAIMLSCYGFTIKRLlqt-ksFRKQKAMKVIIVIVLAFLISWLPYNIAVFTDTLMRfkii 251 coelacanth
NP_001117751 206 athwRLATRGLRHILGFLLPLVIMVACYSITVARLlqt-hgFQKHRAMRVIIAVVFAFLLCWTPLHMTVMADTLMRaklv 284 rainbow trout
Feature 1              #   #  ##  #                         
2LNL_A       255 qESCERRNNIGRALDATEILGFLHSCLNPIIYAFIGqnFRHGF 297 human
NP_001072090 286 pYQCPARTAVDQAVFATQSLGLLHSCINPVLYAFVGekFRRRL 328 torafugu
CAF98209     244 pFDCSVRMAVTTALDVTNSLALVHSCINPVLYAFVGqkFRNNM 286 Tetraodon nigroviridis
BAA31458     297 rFSCFTRMVVDVAMYATQNLGLLHCCVNPVLYAFVGekFRKRF 339 common carp
AAH84427     274 nETCEKREHLDAALSTTEIFGYTHSCINPILYAFIGqkFWNSF 316 African clawed frog
P35407       282 kETCERQNEINKALEATEILGFLHSCLNPIIYAFIGqkFRHGL 324 Norway rat
XP_001514199 283 tDSCGLRDHVDRALVVTPVLGYLHSCLNPIVYAFVGqkFRHSL 325 platypus
XP_006636758 315 sYSCETRNSIDLALFFTQSLGLLHSCINPVLYAFVGqkFRRNL 357 spotted gar
XP_006008393 252 sETCELREQLGTALYATQSLALLHSCINPILYALIGvkFRNNF 294 coelacanth
NP_001117751 285 rFDCAVRNRVDLALQVTHSLALVHSFVNPVLYAFVGekFRGNL 327 rainbow trout

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