3QOY,3FIK


Conserved Protein Domain Family
rplA_bact

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TIGR01169: rplA_bact 
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ribosomal protein L1, bacterial/chloroplast
This model describes bacterial (and chloroplast) ribosomal protein L1. The apparent mitochondrial L1 is sufficiently diverged to be the subject of a separate model. [Protein synthesis, Ribosomal proteins: synthesis and modification]
Statistics
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PSSM-Id: 211630
Aligned: 23 rows
Threshold Bit Score: 325.011
Created: 8-Oct-2014
Updated: 25-Oct-2021
Structure
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Program:
Drawing:
Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
3QOY_A         3 RRGKKYIEASKLVDRNKRYTLEEAVDLLKKMEEVlqrRFDETVELAMRLNVDPRYADQMVRGSVVLPHGLGKPIKVVVFA 82  Aquifex aeolicus
Q9Z9A3         3 KHGKRIRGILKNYDFSKSYSLREAIDILKQCPPV---RFDQTVDVSIKLGIDPKKSDQQIRGAVFLPNGTGKTLRILVFA 79  Chlamydia pneum...
P36236         4 KLSKRMQAAIAKVDDSKLYSPLEAMELLKETATA---KFDETAEAHIRLGIDPKYSDQQIRTTVSLPKGTGQTVRVAVLA 80  Synechocystis s...
P48125         3 KRSRRMQELVGKVEEQ-LYEPLEAIQLLKQISTA---KFIETVEVHCRLGIDPKYNDQQLRATVTLPNGTGQTLRVAVIT 78  Cyanophora para...
P96932         3 KTSKAYRAAAAKVDRTNLYTPLQAAKLAKETSST---KQDATVEVAIRLGVDPRKADQMVRGTVNLPHGTGKTARVAVFA 79  Mycobacterium t...
O51353         3 KKGKKYIEAFSKVDKNKFYNIEDAILLLKEIKFA---KFDETIDISINLNL--KK-NHTVRDTIVLPNQFMKPKRILVFA 76  Borrelia burgdo...
O83266         2 KRGKKYRAAVARYDRAERFSLDRAVGLLKEVRYA---SFDETVEVHVSLRL--KK-NQTVRDTVVLPHRFRAEVRVLVFC 75  Treponema palli...
P47328         3 KLSKRMQAVTKLIDKNKLYPIQEAFELIKKTAIT---KFVSSVDIAVSLNLDTTKAEQQLRGAIAFPFSIGKSIRILAIT 79  Mycoplasma geni...
WP_010888677   3 KHGKRYRALEGKVDRNKQYSIDEAAALVKELATA---KFDETVEVHFRLGIDPRKSDQNVRGTVALPHGTGRSVRVAVIT 79  Deinococcus rad...
WP_002218415   3 KVSKRLKALRSSVEANKLYAIDEAIALVKKAATA---KFDESVDVSFNLGVDPRKSDQVIRGSVVLPKGTGKITRVAVFT 79  Neisseria menin...
3QOY_A        83 EGEYAKKAEEAGADYVGGDELINKIlKEEWTDFDVAIATPEMMPKVA-KLGRILGPRGLMPSPKTGTVTTNVEQAIKDAK 161 Aquifex aeolicus
Q9Z9A3        80 SGNKVKEAVEAGADFMGSDDLVEKI-KSGWLEFDVAVATPDMMREVG-KLGKVLGPRNLMPTPKTGTVTTDVAKAISELR 157 Chlamydia pneum...
P36236        81 RGEKVKEATDAGADIAGSEELIEEI-QKGMMDFDVLIATPDMMPKIA-RLGKQLGPRGLMPSPKGGTVTADLAAAVNEFK 158 Synechocystis s...
P48125        79 RGEKINEASTAGADLVGAEELIDEI-QNGRLDFDCLIATPDMMPQVA-KLGRVLGPRGLMPSPKGGTVTFDLAQAINDFK 156 Cyanophora para...
P96932        80 VGEKADAAVAAGADVVGSDDLIERI-QGGWLEFDAAIATPDQMAKVG-RIARVLGPRGLMPNPKTGTVTADVAKAVADIK 157 Mycobacterium t...
O51353        77 KGDRADEARAFGATYVGDDDLINKI-KSGWDEFDVVVATPDMMKDVG-RLGPILGKRGLMPNPKTQTVTNNLKDAINSLK 154 Borrelia burgdo...
O83266        76 KEDRVSEALAAGAAYAGGAEYLEKV-KGGWFDFDVVVASPDMMKDVG-RLGMVLGRRGLMPNPRTGTVSADLGAAVCELK 153 Treponema palli...
P47328        80 DD--EKKASEAGADFVGGLDKIEAI-KNGWLDFDLIITSPKFMGALG-KLGKLLGTRGLMPNPKTETVTDDVVSAIKAYK 155 Mycoplasma geni...
WP_010888677  80 KGENVQAAEAAGADVVGSDELIERI-AGGFMDFDAVVATPDMMAQIGqKLARLLGPRGLLPNPKSGTVGADVAGMVRGLK 158 Deinococcus rad...
WP_002218415  80 QGANAEAAKEAGADIVGFEDLAAEI-KAGNLNFDVVIASPDAMRIVG-QLGTILGPRGLMPNPKVGTVTPNVAEAVKNAK 157 Neisseria menin...
3QOY_A       162 RGRVEFKVDKAGNVHMPVGKISFEKEKLIDNLYAAIDAVVRAKPPGAKGQYIKNMAVSLTMSPSVKLDINEV 233 Aquifex aeolicus
Q9Z9A3       158 KGKIEFKADRAGVCNVGVGKLSFESSQIKENIEALSSALIKAKPPAAKGQYLVSFTISSTMGPGISIDTREL 229 Chlamydia pneumoniae
P36236       159 AGKLEFRADRTGIVHVMFGKASFSADDLLANLKALQETIDRNRPSGAKGRFWRTVFVSSSMGPSIPVDINAL 230 Synechocystis sp. PCC 6...
P48125       157 AGKLEFRNDRTGIVHVLFGKANFSEEALLGNLKAVQEAVDRNRPSGVKGKYWKSIYITSTMSPSIEVDYNLL 228 Cyanophora paradoxa
P96932       158 GGKINFRVDKQANLHFVIGKASFDEKLLAENYGAAIDEVLRLKPSSSKGRYLKKITVSTTTGPGIPVDPSIT 229 Mycobacterium tuberculosis
O51353       155 KGRTEFRANKNGVISFSFGKSSMDNEKIKENYEEFVKEVVKKRPSDLKGAFIDSIYISSTMGPSIKVNFVWR 226 Borrelia burgdorferi B31
O83266       154 KGRVEFRADKTGVVHLAVGKTTMDSAQIVENVDVFLSEMDRKKPVDVKAGFVRSISLSSSMGPGIWVVHKSE 225 Treponema pallidum subs...
P47328       156 KGKKEYRTDSFGNIHLSLGKTDTKTEHLVANAMALIDLIKSKRPSTVKGTYIKNIALTTTMGPSLKVKLPD- 226 Mycoplasma genitalium G37
WP_010888677 159 AGRIEFRNDKTGVVHAPIGKASFESGNLSANYQALISALEGAKPGTAKGVFLRSAYLTTTMGPSIPLALgga 230 Deinococcus radiodurans
WP_002218415 158 AGQVQYRTDKAGIVHATIGRASFAEADLKENFDALLDAIVKAKPAAAKGQYLKKVAVSSTMGLGIRVDTSSV 229 Neisseria meningitidis
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