Conserved Protein Domain Family
fliF

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PRK06007: fliF (this model, PSSM-Id:235668 is obsolete)
flagellar basal body M-ring protein FliF
Statistics
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PSSM-Id: 235668
Aligned: 404 rows
Threshold Bit Score: 324.14
Created: 9-Dec-2010
Updated: 2-Oct-2020
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
116049030  20 LKKSFPGLSFLDNLSEMTMLRQIGLLVGLAASVAIGFAVVLWSQQPDYKPLYGSLNGVDANRVVEALTAADIP-YKVEPN 98 
134300247   1 MNFNDLLERLKQRWQETSQNRKVLVILVSTVVLAGLVYLAMTLTKPNYAILLGDLEPKDAGDIVAQLESEKIP-YQLIDQ 79 
147678424   1 MSPGDLAARFRERWQSLSQTQKVISVLVASGALVCLFYLGQLATRPAYAPLFTGLEPKDAGVIVDELKALKIP-YQIADE 79 
169831911   1 MKGQAVAARMNERWQALSTTHKVALVLLVIGSLLVLYYLAQFVRQMNYTTLFAGLEPREAGAIVEQLDGMRIP-YMLSDG 79 
187935660   2 NKLLEKVKGLWEKFKTQSKKIKIAIFVSCVAVIIAIASTAIYTSSNKYQVLFSNLDPKDAQTILAKLNEQKVT----TKI 77 
188589083   2 NKLLEKVKGLWEKFKSQSKKIKIAIFISCVAVIIAIISTMIYTSSNKYQVLFSNLDPKDAQTILAKLNEQKVT----TKI 77 
258514003   1 MTPRELLDRLKQRWQSLSQVKKAFVIIAGTGILAATLYLITFLTQTSYTPLMTNLEPRDAGAIEEKLKSLKYEdFKLADQ 80 
260893875   3 LATKPVWERWKSRWESFSPVQRVAVVVAGVALIACCVFLPLYLAQLNYAPLFKGLRPEDAGAVVQKLEEMKVP-YRMTDG 81 
302874589   2 SKIADLIAKIKGIFNGMSKVRKISIGLITAVVIVAIVALIITTGKTKYTALFNNLDATDSQNIVTKLKEEGIP-YKVENS 80 
78045011    1 MDFQSLLASIKERFQNLSSFQKRAYGILILTAVLSLLLGYIFLGRPSYTPLATGLDAKEAGAIAEKLKEWKIN-YKLGDE 79 
116049030  99 -SGALLVKADDLGRARMKVASAGVaP--TDNNV-GFEILDKEQALGTSQFMEATNYRRGLEGELARTVSSLNNVKAARVH 174
134300247  80 -GTTILVPQEQVDEIRVKLASDGL----LTGVGnGFELFDKSK-FGETDFEQQISYQRALQEELRRTITKVEGVEQARVH 153
147678424  80 -GKTIKVPEDKVYEVRIQLASSGA----LGGGGmGFELFDQSK-LGQTDFEQQVGYQRALQEELRRTIVQLEGVEQARVH 153
169831911  80 -GTTIQVPRAQVDQARIQLATSGA----LGADGaGWELFDRTK-LGVTEFEQQVNYQRALQEELRRTIVQLDEVEAARVH 153
187935660  78 qGDTILVPNDKVDQLRLELA-----PelKSGSS-GYELMDSGSSFGMTDEEFKVKKLRMQEGELEKTIKSFSQIESARVH 151
188589083  78 qGDTILVPNDKVDQLRLELA-----PelKSGSS-GYELMDSGSSFGMTDEEFKVKKLRMQEGELEKTIKSFSQIESARVH 151
258514003  81 -GTTIMVPKEQVYEIRIKLASSGV----LQGGGlGFELFDQNQ-MGVSDFEQQVDYQRALQEELRRTIIQLEEVEQARVH 154
260893875  82 -GTTILVPKDQVYKVRAELAAKGAlP----GAGkGFELFDKTR-LGITDFEEQVNYQRALQEELRRTILQFDGVEDARVH 155
302874589  81 -TNTIMVPDEQVGQLRLQ-YAADI----KSGSI-GLEIFDTSSQLGISDAEFNVKYQRALQGEIERTVKSFEQVEDAKVN 153
78045011   80 -GTTILVPKSQVYEARIKLASAGVlE--TNSGI-GFELFDQTK-LGASDFENQVNYQRALQEELRRTIVQLDAVEDARVH 154
116049030 175 LAIPKSSVFVRDDRKPSASVLVELYPGRslEPSQVMAIVNLVATSVPELDKSQVTVVDQKGNLLs-----DQQELSELTM 249
134300247 154 LVLPRKSVFIEEEGTASASVVVKLKPRAklKAEQVKGLNDLIIGSVEGLQAENVHIIDTEGNVLn-----DFLKDSSGTP 228
147678424 154 LVIPQKSVFIGERGTPSAAVALKLKPAArlKPEQVQGICDLLVGSVEGLKPENVHIIDTEGNVLs-----DDLKSGEWAV 228
169831911 154 LVLPEKSIFATEKAPPTASVAVKLRPGTdlNQSQVRGVVALVAGSVEGLTPENVHLVDMRGRLLh----pDGHQDPVSGL 229
187935660 152 ITPSTDSVFVKESTPGKAAVYLELKTGSeiTKDQVKSIVALVSGSTENVPKENIEVIDDKMNLLtanlndDENEMMSSES 231
188589083 152 ITPSTDSVFVKESTPGKAAVYLELKTGSeiTKDQVKSIVALVSGSTENVPKENIEVIDDKMNLLtanlndDENEVMSSES 231
258514003 155 LVLPQKSVFVDEQEPASVSIALKLKPLAklKPEQVKGIADLAVGSIQGLKLENVHIIDMQGHIL--------SD----TI 222
260893875 156 LVLPPRSPFVTEQPKPSASVVLKLKPLEklKPEQVEGIVALVSGAVQGLKPEDVRVIDTRGEVLt-----PPTQGGEVGA 230
302874589 154 IVLPEDSTFVKDTAPASVSITLKLKPGTelSEEQVKAIVSLVSTSVKNLPKENIQIVDNNMRLLtdk-lfKGSEDESSVT 232
78045011  155 LVLPEKSVFISEEKPATASILLKLKPLKklTPQEIKGIIYLVANSVEGLKPENVQVVDTYGNVLsd---qVDLSSSLSAQ 231
116049030 250 AGK-----------QFDFTRRMEGLLTQRVHNILQPVLGNGRYKAEVSADVDFSAVESTSEM-YNPDQPALRSEQRNNEE 317
134300247 229 GNGfsgt---ilerQQQIRRTYEKELENRVQNMLAKVLGPNKAVAMVTAEMDFNQLQTNTTE-VVPG-QVVSERSIKEQG 303
147678424 229 GTKta-------leHQKARREYEKELEKRVQQMLTQIMGQNKAVAMVTADLDFNQQQTTSTVsSNPN-NLRISEHIVRET 300
169831911 230 ALT-----------HQEIKRNYERELEMRLQNMLQRIVGPDRVVVMVSADLDFSQQQSVSTVpY-GE-AQVVSEQTVREE 296
187935660 232 LDK-----------QYSLEKNYESKLQKEIVSLLEPVIGKDKVKATVNVDLDFDSKQQTQTV-LDPN-KVVVSQQTIKEV 298
188589083 232 LDK-----------QYSLEKNYEGKLQKEIVSLLEPVIGKDKVKATVNVDLDFDSKQQTQTV-LDPN-KVVVSQQTIKEV 298
258514003 223 DTEndedssqvinkQQQVRREYEKELEKRIQNVLDRVLGTDKAVSMVTAEMDFNKQEINTT--THGP-GQKVSEQLINEK 299
260893875 231 VRN-----------QQELVLAFERELERRVKNLLDQILGPGKAAVMVNADFDFSRREVVTVL--PQG-QVPVSEHTLTEQ 296
302874589 233 AST-----------QLEEKMKFEDYLEEKILSQLEPMYGQGKVKANVNAVLNFDSVSTETTT-VDKTPPIVSQNISINAS 300
78045011  232 SGR-----------QQEMKKQFETELTNRINNLLTTILGPGKAVVSINADLDFNQEETTSQI--ALP-GPLVSEQGSKEV 297
116049030 318 RQNSSGPQGVPGALSNQPPgpasapqqatasapadyvapgqplkdangqtiiDPKTGKPELAPYPTDKRDQTTRNYELD- 396
134300247 304 SDG--SGGGVTGSTTQMPG----------------------------------QSIPAETSTSQNSYIKTDDTKNYQHG- 346
147678424 301 GGG-TEAGGPPGTDSNLST------------------------------------YPALQGAGTTNYSREESTINYQVN- 342
169831911 297 SEGSGTGGGVPGTDANLPAt-------------------------------yPLAGRPADAGAPTSFVREERTANYQVG- 344
187935660 299 NNT-----DANGNISESPVdn------------------------------nISNTTDDTNNTKSNSSREEQKNNYEIG- 342
188589083 299 NNT-----GADGNISESPVdn------------------------------nISNTTDDTNNTNSNSSREEQKNNYEIG- 342
258514003 300 SQGTGL-GGVTGTDAQNTQty------------------------------pT-G----T-DNVESASRDESITNYQVD- 341
260893875 297 GAA----QAAAGVAPTYPA----------------------------------------GGAGGQNYSKQETTRNYQVG- 331
302874589 301 DAN--------NTTGNSPVd-------------------------------nNLSNVINEYMQNGNISSANQTTNYSTDg 341
78045011  298 VYG---SPGASGTVGTGPNt-------------------------------nQNYPYINGSTNGEVQVKEDFTRNYQVG- 342
116049030 397 RSISYTKQQQGRLRRLSVAVVLDDQMkvdaktgevshqpwSADELARFTRLVQDSVGYDASRGDSVSVINAPFAp----- 471
134300247 347 TRTQSEVQAPGKLIKLSTAVVLDESV--------------KNLDRTQVEKIVTAAIGFDDQRGDQITVSAMTFDrsqyd- 411
147678424 343 TVQETVVKAPGTVRRLSASVVLNETD--------------GPVDVQKVRDVVAAAIGYDQARGDQINVSSMAFDdsylkk 408
169831911 345 TLQQTVIQPPGEVRRLSTSVVVDGDl--------------SAARAEQIQGVVTAALGYNPERGDQILVAPMAFDttyqeq 410
187935660 343 KTETKVISAPGEVKRMTASVVVDGNl--------------DAATQQAIENAVSNAIGFNSVRGDQISVLGMNFDpslked 408
188589083 343 KTETKVISAPGEVKRMTASVVVDGNl--------------DAATQQAIENAVSNAIGFNSVRGDQISVLGMNFDpslked 408
258514003 342 TTQQKVVQPPGTIKKLSTSVVVDGKL--------------SATRIQQIESLVSTAIGYDQARGDQINVTNIAFDtsyqdk 407
260893875 332 EQREKVIEVPGRLRRLTASVVVDGNl--------------DPVTMQKIQNLVAGALGYNPQRGDQITVDSFTFDrtyqrq 397
302874589 342 KVIERKQNALGNVTAVSAAVAIDNAEl-------------TERQLADVKKLVNKTIGQAKQNEDETIVMAYEFNpelkas 408
78045011  343 QTVYKLVKAPGTVKRLSAAIAIDSg--------------vPAADVNKIRDIVAAAMGYDQNRGDQIIINTITFDktlakq 408
116049030 472 --------AQAEEIDSIPFySQPWFWDIVKQvl--gVLFILVLVFGVLRPVLSNItgggkgKSLAGGGGRDGDLALGESG 541
134300247 412 ----ldqdLPDNSQKEKEL----FYMTIAAVvg--gLLLLLLLVAYWLRRRRKNA-----------EQELQVIEETTPMP 470
147678424 409 ---veaemAEAESRARFKE----RLYLYALSggallLVVLSILALLLWRRRAVQRv------------------eEEPEF 463
169831911 411 leedlrraEALAAERERRQ----LIYYAALAggvllLLIILIIAGVVVGRRLQRA-----------PRPQPQPEVEELSP 475
187935660 409 tqnqtdafNAEAKQKEMQK----------YMimgaiALLALIVIIVILVKKRRKN-----------AKDEYDDDTQLLDV 467
188589083 409 aqsqvdafNAEAKQKEMQK-----YMIMGai----aLIAIIIVIVILVKKRRKNA------------ADEYDDETQLLDV 467
258514003 408 ---mqaemGKEETLAAQKQ-RQQLIYF-AIAgavifLIMSAFLIAYMRRRR--RQq------------------qEDTLE 462
260893875 398 meaemakaEAKARQEAAKR----RLYTLIGAga--gGLLGLVLLLLLRRRLRRAP-------------------EAPVVE 452
302874589 409 ---iqkslEEMEAAQKAEAq--kKLYTMIGLga--aVVIGLVAFALVLRKRRSKK--------------EELEMIETEDV 467
78045011  409 meeqqaqaQKEQQARQALY----KWLAIGag----aLVFLSIIVFFGIRRFRKKP------AAVADISPRAPVGVSELEA 474
116049030 542 LEGSLADDRVSIGGPSSILLpspteGYDAQLNAIKNLVAQDPGRVAQVVKEWINADE 598
134300247 471 IESVTTKEEEEEEEEAQWEIp----PPKDKQKQLKELAQERPDDIASVLKVWLRE-- 521
147678424 464 VTVREMQAQEERRIREDKQE------------QIRDMAKERPKDVAEILKVWLKD-- 506
169831911 476 LSVAAAAADPVFFLSDKQRG-------------ARELARQKPEEVAQIIKVWLTEK- 518
187935660 468 VVGDEKEPEIFEPIEFETKN-----EKIHMENEIKKYATDKPEQVVEIIKSWLSEDE 519
188589083 468 VIGDEKEAEIFEPIEFETKN-----EKTHMENEIKKYATDKPEQVVEIIKSWLSEDE 519
258514003 463 ESIKSVQDLIEEEQELEVKY------IDVKHDQIKKLAKERPQDIAEILKIWLSEG- 512
260893875 453 EVVPVAVTAVPPPSPTDQKF-----------AEVKELAEKRPEEVAEIIKVWLRSEE 498
302874589 468 VLEEMPIENEINFKPLDLEQk---sQKDHIEDEIRKYAQNKPDQVAEIIKSWLVSDE 521
78045011  475 AAAAERGPGIIVREMTAEPIvi--qKVQSDIEKIKSLVDKNPDEVAMVLRAWLTDE- 528
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