Conserved Protein Domain Family
SMRP1

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pfam15181: SMRP1 (this model, PSSM-Id:373627 is obsolete and has been replaced by 464548)
Spermatid-specific manchette-related protein 1
This family of proteins, SMRP1, is thought to have a role in spermatogenesis and may be involved in differentiation or function of ciliated cells. This family of proteins is found in eukaryotes. Proteins in this family are typically approximately 260 amino acids in length.
Statistics
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PSSM-Id: 373627
Aligned: 3 rows
Threshold Bit Score: 469.491
Created: 21-May-2020
Updated: 7-Aug-2020
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
XP_007498932   1 MFLFAHKTKTPISTYTDSYRAPASIKQDYKDPPLWAWEENKFVSPGLKKPMlEQHVDQQSLEKMVKRAVEEYSYKGSVPG 80  gray short-tail...
EHB02667       1 MFLFSNKTKTPISTYTDSYRAPTSIKEVYKDPPLWAWEANKFVTPGLTQTM-KRHTDPEALQKMAKCATQDYSCKSSMSG 79  naked mole-rat
XP_008271500   1 MFLFSRKTKTPISTYNDSYRAPTSIKEVYKDPPLWAWEANKFVTPGLTQTM-ERHVDPEALRKMVKCNNQDYTYKSSISG 79  rabbit
XP_007498932  81 NPYLPQKYWISEAEAERYNPAFISGDRYGAWRTGPYNSSGWNKYTTYLPRLPKEAGMETMMRGMPLDYPPKPDRFNNYER 160 gray short-tail...
EHB02667      80 HPYLPEKYWLSQEEENKCCPSYLGSDPYCTWRTRPYSSSYWNKYTTCLPRLPKEAGMETAVRGMPLECPPKPERLNAYER 159 naked mole-rat
XP_008271500  80 HPYLPEKYWLSQYE-DKCSPCYLSSDRYNTWRTAPYNSPYWNKYTTCLPRLPKDAGMETVARGMPLEYPPKPERLNAYER 158 rabbit
XP_007498932 161 EVVVNMLNSLSRNQ-LPSIQPR---YT-VPGRLPFQGYDSPCTGRHYCLRGMDYYATGAPSNE-RHL-----TQPT---- 225 gray short-tail...
EHB02667     160 DVVVNMLNSLSRNRtLPQITSRcgcVEpLPGRLPFQGYKSACSGRHYCLRGMDYCTPGPPCTErRHLralcpEQPTvrvs 239 naked mole-rat
XP_008271500 159 EVVVNMLNSLSRNQqLPRVMPRcgcLDpLPGRLPYLGYESACSGRHYCLRGMDYCTGEAPYTE-RRLrplcaEQPT---- 233 rabbit
XP_007498932 226 ECPPLQPqTRNELCClIPPPAITLSLYKP 254 gray short-tailed opossum
EHB02667     240 QCSSGAP-ARNALCC-YNCPAVILPISEP 266 naked mole-rat
XP_008271500 234 GCVTLRPpARNGMCC-YNSPAVILPMSEP 261 rabbit
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