Conserved Protein Domain Family
PRK05803

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PRK05803: PRK05803 
RNA polymerase sporulation sigma factor SigK
Statistics
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PSSM-Id: 180266
Aligned: 73 rows
Threshold Bit Score: 321.51
Created: 9-Dec-2010
Updated: 25-Oct-2021
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
89895149    3 EILVASIALTVLKGVTLLVSYINNN-AFPHPLNEQDEAHYLKVLR-ASKspeatpkdltkaEYARNKLVEHNLRLVAHLV 80 
126698826   1 ---------------------MAALkSFEKPLTPEEEIEYLTKFKiEND------------KSAKDTLIERNMRLVAYIA 47 
289578255   2 WEVVVAILASIVKEILNL-GYLTNTnSFPNPLTPEEEKKYLEAYK-NGD------------EEARNILIERNLRLVAHVV 67 
297544535   2 WEVVVAILASIVKEILNL-GYLTNTnSFPNPLTPEEEKKYLEAYK-NGD------------EEARNILIERNLRLVAHVV 67 
167040139   2 WEVVVAILASIVKEILNL-GYLTNTnSFPNPLTPEEEKKYLEAYK-NGD------------EEARNILIERNLRLVAHVV 67 
304316726   2 WAALIALITSIVKDIINF-GYLTNAsSFPQPLTAEEEKKYFEAYK-NGD------------EEAKNILIERNLRLVAHIV 67 
146295930   1 ------------------MFYIENAnSFPHPLSDEEEEMHLKKMW-EGA------------IEARNILIEKNLRLVAHIA 49 
302871341   6 GMSINYMLTLKSVAGLLPMFYIENQsSFPQPMSSEEEEMYLNKMW-EGC------------KEARNILVEKNLRLVAHIA 72 
222528742   1 ------------------MFYIENQsSFPQPMSPEEEEMYLNKMR-EGC------------KEARNILIEKNLRLVAHIA 49 
20807708    2 WEVIAALVGTIVKEILNL-GYLTNTnSFPSPLSPEEERKYLEAYR-RGD------------EEARNILIERNLRLVAHVV 67 
89895149   81 KKFDG-TGEDSDDLISIGTIGLIKGIDTFDPGKGTKLATYAARCIENEILMHLRSLKKSRGEVSIYDPIGVDKEGNEISL 159
126698826  48 KKYNN-STEDQDDLISIGTIGLIKAIETYNIDKGTRLATYASRCIENEILMNIRSNKKNKTQVSLQDPIGTDKEGNEISL 126
289578255  68 KKYSG-TGKDIDDLISIGTIGLIKAISTFDSSKGTHLATYAARCIENEILMSVRAEKKMKGEVFLQDPIGVDKEGNEISL 146
297544535  68 KKYSG-TGKDIDDLISIGTIGLIKAISTFDSSKGTHLATYAARCIENEILMSIRAEKKMKGEVFLQDPIGVDKEGNEISL 146
167040139  68 KKYSG-TGKDIDDLISIGTIGLIKAISTFDSSKGTHLATYAARCIENEILMSIRTEKKMKGEVFLQDPIGVDKEGNEISL 146
304316726  68 KKYSN-TGKDVDDLISIGTIGLIKAISTYDASKGTHLATYAARCIENEILMSLRSEKKIKSEISLQDPIGIDKEGNAISL 146
146295930  50 KKYTLsFPNLTDDIISVGTIGLIKAIETYSQEKNTRLSTYAAKCIENEILMYLRQNKKFLSQISLENPIGSDKDGNEITL 129
302871341  73 KKYTFsFPNLTDDIISVGTIGLIKAIETYSKDKSTKLSTYAAKCIENEILMYLRQNKKFLSQLSLENPIGSDKDGNEITL 152
222528742  50 KKYTFsFPNLTDDIISVGTIGLIKAIETYSSAKCTKLSTYAAKCIENEILMYLRQNKKFLSQLSLENPIGSDKDGNEITL 129
20807708   68 KKYSG-TGRDLDDLISIGTIGLIKAIDTYDFEKGTHLATYAAKCIENEILMSIRAEKKMKGEVFLQDPIGVDKEGNEISL 146
89895149  160 MDVLASEGEaISDRIENEFEQRVLLDKVK-NLTRRERLVLQLRYGLMNSPRRTQREIAKALGISRSYVSRIEKKAIQKLM 238
126698826 127 LDILGTEANyVLDEVELKVQVGKLYEQLNkILTPREREIVQLRYGLTPYGYKTQREIAQKLDISRSYVSRIEKKALKKLE 206
289578255 147 MDVLGTEENeISEQVEKKIQIKKLYNKMNnVLKNRERLIIEMRYGLYNGKVRTQREIAKMLGISRSYVSRIEKKALNKLF 226
297544535 147 MDVLGTEENeISEQVEKKIQIKKLYNKMNnVLKNREKLIIEMRYGLYNGKVRTQREIAKMLGISRSYVSRIEKRALNKLF 226
167040139 147 MDVLGTEEDeISEQVEKKLQIKKLYSKMNsVLKNREKLIIEMRYGLYNGKVRTQREIAKMLGISRSYVSRIEKKALNKLF 226
304316726 147 IDILGTETDeVSDQVELEMQIKKLYSKINsVLKNRERLIIELRYGLVNGGAKTQREIAKMLGISRSYVSRIEKKALSKLF 226
146295930 130 IDVLQSDQDdIDDQVNVKIQIKNLLRKLDkILKGREKHIIELRYGLKNGKERTQMEVANLLGISRSYVSRIEKKALKKLY 209
302871341 153 MDVLQNDQDdIDEQVDLKIQIKNLLKKLDkILKGREKKIIELRYGLKNGIERTQMEVASLLGISRSYVSRIEKKALKKLY 232
222528742 130 MDVMQNDQEdIDEQVDLKIQIKNLLKKLDkILKGREKKIIELRYGLKNGIERTQMEVANLLGISRSYVSRIEKKALQKLY 209
20807708  147 MDVLGTDEDeVSEQVEKKIQIKKLYSKLNsVLKNRERMIIEMRYGLYNGRVRTQREIAKMLGISRSYVSRIEKKALNKLY 226
89895149  239 EQMEDHDPK 247
126698826 207 KELVQES-- 213
289578255 227 KELTM---- 231
297544535 227 KELTM---- 231
167040139 227 KELSM---- 231
304316726 227 KEMIM---- 231
146295930 210 NELQKSCKE 218
302871341 233 GELQNLGDG 241
222528742 210 GELQKLCDG 218
20807708  227 KELSM---- 231
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