Conserved Protein Domain Family
HDV_ag

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pfam01517: HDV_ag (this model, PSSM-Id:279813 is obsolete and has been replaced by 426302)
Hepatitis delta virus delta antigen
The hepatitis delta virus (HDV) encodes a single protein, the hepatitis delta antigen (HDAg). The central region of this protein has been shown to bind RNA. Several interactions are also mediated by a coiled-coil region at the N-terminus of the protein.
Statistics
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PSSM-Id: 279813
Aligned: 2 rows
Threshold Bit Score: 305.56
Created: 11-May-2020
Updated: 7-Aug-2020
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
P0C6L3   1 MSRPEGRKNRGGREEVLEQWVSGRKKLEELERDLRKVKKKIKKLEDEHPWLGNIKGILGKKDKDGEGAPPAKRARTDQME 80  Hepatitis delta virus...
P0C6L3   1 MSRPEGRKNRGGREEVLEQWVSGRKKLEELERDLRKVKKKIKKLEDEHPWLGNIKGILGKKDKDGEGAPPAKRARTDQME 80  Hepatitis delta virus...
P0C6L3  81 VDSGPRKRPSRGGFTDKERQDHRRRKALENKRKQLSAGGKNLSKEEEEELRRLTEEDERRERRIAGPQVGGVNPLEGGTR 160 Hepatitis delta virus...
P0C6L3  81 VDSGPRKRPSRGGFTDKERQDHRRRKALENKRKQLSAGGKNLSKEEEEELRRLTEEDERRERRIAGPQVGGVNPLEGGTR 160 Hepatitis delta virus...
P0C6L3 161 GAPGGGFVPSMQGVPESPFTRTGEGLDIRGSQGFP 195 Hepatitis delta virus (ISOLATE D380)
P0C6L3 161 GAPGGGFVPSMQGVPESPFTRTGEGLDIRGSQGFP 195 Hepatitis delta virus (ISOLATE D380)
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