2YU4,3HTK


Conserved Protein Domain Family
SPL-RING_NSE2

?
cd16651: SPL-RING_NSE2 (this model, PSSM-Id:319565 is obsolete and has been replaced by 438313)
Click on image for an interactive view with Cn3D
SPL-RING finger found in E3 SUMO-protein ligase NSE2 and similar proteins
NSE2, also known as MMS21 homolog (MMS21) or non-structural maintenance of chromosomes element 2 homolog (Non-SMC element 2 homolog, NSMCE2), is an autosumoylating small ubiquitin-like modifier (SUMO) ligase required for the response to DNA damage. It regulates sumoylation and nuclear-to-cytoplasmic translocation of skeletal and heart muscle-specific variant of the alpha subunit of nascent polypeptide associated complex (skNAC)-Smyd1 in myogenesis. It is also required for resisting extrinsically induced genotoxic stress. Moreover, NSE2 together with its partner proteins SMC6 and SMC5 form a tight subcomplex of the structural maintenance of chromosomes SMC5-6 complex, which includes another two subcomplexes, NSE1-NSE3-NSE4 and NSE5-NSE6. SMC6 and NSE3 are sumoylated in an NSE2-dependent manner, but SMC5 and NSE1 are not. NSE2-dependent E3 SUMO ligase activity is required for efficient DNA repair, but not for SMC5-6 complex stability. NSE2 contains a RING variant known as a Siz/PIAS (protein inhibitor of activated signal transducer and activator of transcription)-like RING (SPL-RING) finger that is likely shared by the SP-RING type SUMO E3 ligases, such as PIAS family proteins. The SPL-RING finger is a variant of RING finger, which lacks the second, fifth, and sixth zinc-binding residues of the consensus C3H2C3-/C3HC4-type RING fingers. It harbors only one Zn2+-binding site and is required for the sumoylating activity.
Statistics
?
PSSM-Id: 319565
Aligned: 39 rows
Threshold Bit Score: 73.0476
Created: 22-Dec-2011
Updated: 2-Oct-2020
Structure
?
Program:
Drawing:
Aligned Rows:
 
Zn binding siteSPL-RING finger
Conserved site includes 4 residues -Click on image for an interactive view with Cn3D
Feature 1:Zn binding site [ion binding site]
Evidence:
  • Structure:2YU4; Homo sapiens NSE2 (Mms21) binds one Zinc2+ ion through its SPL-RING finger.
    View structure with Cn3D

Sequence Alignment
?
Format: Row Display: Color Bits: Type Selection:
Feature 1                                   #  #                      #    #                     
2YU4_A         8 FTCPITKEEMKKPV---------KNKVCG-HTYEEDAIVRMIEsrqkrkkkAYCPqiGCShtdirksDLIQDEALRRAIE 77  human
EAL46341     140 FICPLTKKPFVNPV---------KAQVCG-HIFSKQAIYNLIGrn----ktIKCPvaGCDhsf-ginDLIEDYETQHAMD 204 Entamoeba histo...
XP_011402477   9 LTCPITLKDLEKPV---------KNTTCG-HIYSKDAVLAHVRsrp--agrAKCPvgGCPemi-lehNLEADKDTERALR 75  Amphimedon quee...
Q7RZA1       292 LTCKLTLRPLKEPY---------ANHKCP-HVFEKTAIMEYLRgtg---gkAQCP--VCTkel-rikDLYLDELTLRKVK 355 Neurospora crassa
Q5CJM4       112 KVCCLTRDVFKDPVshrydtsekVENMCKnHIYEKDALLKYLGss----kkKICPiaGCNflv-vkkFLKRDQEVLDQIQ 186 Cryptosporidium...
XP_004346124 160 EICPITKSRLVEPV---------RSSRCT-HTFSRKAIQQLYQqak---kkLICPvpGCNqei-rleELERNIDMEKQLR 225 Capsaspora owcz...
Q4PIR3       177 NRCPLTLQPIVHPI---------LSTACN-HFYEKDAILSLLNp------tCVCPvvGCEarl-qrsLLKEDEILERRLR 239 Schizosaccharom...
EFA80241     174 IICPITKKNFENPV---------KSRTCG-HTFSKEAIQSMFRrs----tsISCPvvGCShqi-tqnGLERDIVMEETVK 238 Polysphondylium...
CDS02155     243 FRCPLGTDIMEDPL---------SNTACT-HSYSRAAIEKYVAag-----nNICPafSCTaqv-srhTLKQDPLLVKKSA 306 Sporisorium sci...
CEH12885     144 YRCPLSISTMKDPL---------SSTVCS-HSYEREAIVAYLQqhr---dhVTCPvnGCRatl-rrsNLQENPSLKREAQ 209 Ceraceosorus bo...
Feature 1         
2YU4_A        78 N 78  human
EAL46341     205 R 205 Entamoeba histolytica HM-1:IMSS
XP_011402477  76 R 76  Amphimedon queenslandica
Q7RZA1       356 R 356 Neurospora crassa
Q5CJM4       187 C 187 Cryptosporidium hominis
XP_004346124 226 R 226 Capsaspora owczarzaki ATCC 30864
Q4PIR3       240 R 240 Schizosaccharomyces pombe 972h-
EFA80241     239 R 239 Polysphondylium pallidum PN500
CDS02155     307 L 307 Sporisorium scitamineum
CEH12885     210 A 210 Ceraceosorus bombacis

| Disclaimer | Privacy statement | Accessibility |
NCBI Home NCBI Search NCBI SiteMap