1M7B,1GWN,2V55


Conserved Protein Domain Family
Rnd3_RhoE_Rho8

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cd04172: Rnd3_RhoE_Rho8 
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Rnd3/RhoE/Rho8 GTPases
Rnd3/RhoE/Rho8 subfamily. Rnd3/RhoE/Rho8 is a member of the novel Rho subfamily Rnd, together with Rnd1/Rho6 and Rnd2/Rho7. Rnd3/RhoE is known to bind the serine-threonine kinase ROCK I. Unphosphorylated Rnd3/RhoE associates primarily with membranes, but ROCK I-phosphorylated Rnd3/RhoE localizes in the cytosol. Phosphorylation of Rnd3/RhoE correlates with its activity in disrupting RhoA-induced stress fibers and inhibiting Ras-induced fibroblast transformation. In cells that lack stress fibers, such as macrophages and monocytes, Rnd3/RhoE induces a redistribution of actin, causing morphological changes in the cell. In addition, Rnd3/RhoE has been shown to inhibit cell cycle progression in G1 phase at a point upstream of the pRb family pocket protein checkpoint. Rnd3/RhoE has also been shown to inhibit Ras- and Raf-induced fibroblast transformation. In mammary epithelial tumor cells, Rnd3/RhoE regulates the assembly of the apical junction complex and tight junction formation. Rnd3/RhoE is underexpressed in prostate cancer cells both in vitro and in vivo; re-expression of Rnd3/RhoE suppresses cell cycle progression and increases apoptosis, suggesting it may play a role in tumor suppression. Most Rho proteins contain a lipid modification site at the C-terminus, with a typical sequence motif CaaX, where a = an aliphatic amino acid and X = any amino acid. Lipid binding is essential for membrane attachment, a key feature of most Rho proteins. Due to the presence of truncated sequences in this CD, the lipid modification site is not available for annotation.
Statistics
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PSSM-Id: 206735
Aligned: 7 rows
Threshold Bit Score: 392.494
Created: 1-Mar-2006
Updated: 2-Oct-2020
Structure
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Program:
Drawing:
Aligned Rows:
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Conserved site includes 13 residues -Click on image for an interactive view with Cn3D
Feature 1:GTP/Mg2+ binding site [chemical binding site]
Evidence:
  • Structure:1M7B: Human Rnd3/RhoE binds GTP and Mg2+, defined by 3.5A contacts
    View structure with Cn3D
  • Comment:Rho molecules assume an active conformation when bound to GTP and inactive when GTP is hydrolyzed to GDP
  • Comment:Mg2+ ion plays a key role in bringing together the functional regions of the phosphate-binding, switches I and II
  • Citation:PMID 9545299

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1                      ######                                      ## #                  
1M7B_A         3 NQNVKCKIVVVGDSQCGKTALLHVFAKDCFPENYVPTVFENYTASFEIDTQRIELSLWDTSGSPYYDNVRPLSYPDSDAV 82  human
1GWN_A        24 NQNVKCKIVVVGDSQCGKTALLHVFAKDCFPENYVPTVFENYTASFEIDTQRIELSLWDTSGSPYYDNVRPLSYPDSDAV 103 house mouse
2V55_B        19 NQNVKCKIVVVGDSQCGKTALLHVFAKDCFPENYVPTVFENYTASFEIDTQRIELSLWDTSGSPYYDNVRPLSYPDSDAV 98  human
AAH68920      19 NQNVKCKIVVVGDSQCGKTALLHVFAKDSFPENYVPTVFENYTASFEIDTQRIELSLWDTSGSPYYDNVRPLSYPDSDAV 98  African clawed ...
AAH59452      19 SQSLKCKIVVVGDSQCGKTALLHVFAKDCFPENYVPTVFENYTASFEIDKQRIELSLWDTSGSPYYDNVRPLSYPDSDAV 98  zebrafish
XP_422158     19 NQNVKCKIVVVGDSQCGKTALLHVFAKDCFPESYVPTVFENYTASFEIDTQRIELSLWDTSGSPYYDNVRPLSYPDSDAV 98  chicken
NP_001002591   4 HHDLKCKIVVVGDTQCGKTSLLNVFAKDSFPENYVPTVFENYTASFEVDTLRVELSLWDTSGSPYYDNVRPLSYPDADAV 83  zebrafish
Feature 1                                             # #                                        
1M7B_A        83 LICFDISRPETLDSVLKKWKGEIQEFCPNTKMLLVGCKSDLRTDVSTLVELSNHRqtPVSYDQGANMAKQIGAaTYIECS 162 human
1GWN_A       104 LICFDISRPETLDSVLKKWKGEIQEFCPNTKMLLVGCKSDLRTDVSTLVELSNHRqtPVSYDQGANMAKQIGAaTYIECS 183 house mouse
2V55_B        99 LICFDISRPETLDSVLKKWKGEIQEFCPNTKMLLVGCKSDLRTDVSTLVELSNHRqtPVSYDQGANMAKQIGAaTYIECS 178 human
AAH68920      99 LICFDISRPETLDSVLKKWKGEIQEFCPNTKMLLVGCKSDLRTDLTTLVELSNHRqtPVSYDQGANMAKQIGAaTYIECS 178 African clawed ...
AAH59452      99 IICFDISRPETLDSVLKKWKGEIQEFCPNTKMLLVGCKSDLRTDLTTLVELSNHRqtPVSYDQGSAMAKQISA-PYIECS 177 zebrafish
XP_422158     99 LICFDISRPETLDSVLKKWKGEIQEFCPNTKMLLVGCKSDLRTDVSTLVELSNHRqtPVSYDQGANMAKQIGAaTYIECS 178 chicken
NP_001002591  84 LICFDIGRPETLENVLRKWKGEIEEFCPNTKILLVGCKSDLRADLATFVQLSNDI--PSSYDQGSNMAKLISA-PYIECS 160 zebrafish
Feature 1        ##                    
1M7B_A       163 ALQSENSVRDIFHVATLACVNK 184 human
1GWN_A       184 ALQSENSVRDIFHVATLACVNK 205 house mouse
2V55_B       179 ALQSENSVRDIFHVATLACVNK 200 human
AAH68920     179 ALQSENSVRDIFHVATLACVNK 200 African clawed frog
AAH59452     178 AVQSENSVRDIFHVATLACVNK 199 zebrafish
XP_422158    179 ALQSENSVRDIFHVATLACVNK 200 chicken
NP_001002591 161 AQQSENSVRDIFHIATLACVSK 182 zebrafish

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