Conserved Protein Domain Family
LT_Slt70-like

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cd16896: LT_Slt70-like 
uncharacterized lytic transglycosylase subfamily with similarity to Slt70
Uncharacterized lytic transglycosylase (LT) with a conserved sequence pattern suggesting similarity to the Slt70, a 70kda soluble lytic transglycosylase which also has an N-terminal U-shaped U-domain and a linker L-domain. LTs catalyze the cleavage of the beta-1,4-glycosidic bond between N-acetylmuramic acid (MurNAc) and N-acetyl-D-glucosamine (GlcNAc), as do "goose-type" lysozymes. However, in addition to this, they also make a new glycosidic bond with the C6 hydroxyl group of the same muramic acid residue.
Statistics
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PSSM-Id: 381617
Aligned: 137 rows
Threshold Bit Score: 109.522
Created: 19-Sep-2016
Updated: 2-Oct-2020
Structure
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Aligned Rows:
 
putative sugarcatalytic
Feature 1:putative sugar binding site [chemical binding site]
Evidence:
  • Comment:Peptidoglycan-binding residues defined by comparison to lytic transglycosylase (LT) and goose egg white lysozyme (GEWL)
  • Citation:PMID 7823320

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1                                                    #                 ###  #            
NP_347734     30 PVRYVSYIEKYske----------------ndIDPYFVMAVIRVESNFNasarSNKDAYGLMQITPETAEWAaekmglq- 92  Clostridium ace...
WP_012002060  21 PVKYYSVVRENsk------------------pLDPLLIMALIKVESNFRenaiSPAGAIGLMQVMPRTADWMkekfn--- 79  Pseudothermotoga
ABS60860      24 PLKYYDIIVQNck------------------sLDPLLVISVIKTESSFRenaeSSLGAYGLMQLMPETAEWLnkkfk--- 82  Fervidobacteriu...
EHR34845      34 HKPYMGYIEKYsqe----------------nkLDEKLITALVKTESSFNpnahSKADARGLMQLVPETGKWVasqlde-- 95  Helcococcus kun...
NP_228729     23 PDDYYDFISKNsd------------------dLDPLLIQSIIWVESSFDrnavSSLGAFGLMQIMPSTAVWLkkkfs--- 81  Thermotoga mari...
WP_021278715 113 PKPLRINARKYvdhifh---------fseknrLDPIWVMAIIWTESHFKprasSRVSATGLMQIMPNTGTFLsrllkrpn 183 Bacteriovorax s...
BAI81060      87 NIKYSTMDISYtivde-----------stkehIDPYLILSLILTESSFNhksiSRKGAIGLMQILPNTAYYVsqlnddi- 154 Deferribacter d...
WP_021271146 118 SIPFIDDALKAask----------------yqIDPFWLLAIMWTESHFNpnaeSHVYAQGLMQVMPSTAKYIagklthdf 181 Bacteriovorax s...
AGH95779      77 SRYIEQYVQKRnkrinaesftqtlmnlsqdhsYDPIFLLAVIQTESSFNfnavGSVGEIGLMQIRPNTAEWIskkknlp- 155 Bdellovibrio ex...
ACJ74582      24 PLKYIDLIPNSs--------------------FDKLLILSIIKVESSFKtnaiSNVGAYGLMQVLPSTAEWInnkfn--- 80  Thermosipho afr...
Feature 1                             #                  ##                                      
NP_347734     93 --nfkvddLSDPEINIKIGCWYLKDLssefggdQTLILAAYNGGRGnvkkwlnnktnskdgktlhyipygeTSKYVKKVM 170 Clostridium ace...
WP_012002060  80 ---lidsnVNHPVDNIVLGTTYLKYLmqlydenIDLALMAYNVGPSqlet-----------------rktlAEKYLYRIK 139 Pseudothermotoga
ABS60860      83 ----tnydYKIPEDNIALGCLYLNYLmek-dgdIYKALVHYNTGPYasdei----------------kndaGERYIKKVM 141 Fervidobacteriu...
EHR34845      96 --efkeenLKDPETNIRYGTYYFKHLlnq-fksVDYAIIAYNAGPTnvknwidggiltgsyedyenipiqeAKDYIQKVK 172 Helcococcus kun...
NP_228729     82 ----leedFKNPEGNIIYGIVYLKFLkdl-ygdLDKAIMAYNVGPAalseg---------------rnldsAKRYLKKVK 141 Thermotoga mari...
WP_021278715 184 dknlvmqlLVDPRSNIELGTFYLRRLlnr-fksHRYATVAYNMGPRfvsrrik-----------nkmpvgnKNQYYDKVK 251 Bacteriovorax s...
BAI81060     155 -dishrkeLFDPITNIKIGISYFSYLlkkyngnVKYAIIAYNLGPTklnyrl-------------rknkklPKFYYNKVL 220 Deferribacter d...
WP_021271146 182 pkknvkkyIRTPKRNIEYGAFYLNYLhnkfsgnSMHATVAYNMGPAfvrislk-----------ngrpvgkKNLYLTKVR 250 Bacteriovorax s...
AGH95779     156 --wkgaqaLKDPEYNILLGAHYFQYLkstmdseSLKYVNAYNMGPTsakrma-------------qnnnlkKHPYFGKVV 220 Bdellovibrio ex...
ACJ74582      81 ----tnynLKVPKDNILLGITYLEYLyni-tkdLQKTISYYNTGPNasdei----------------vktaGLNYYNKIM 139 Thermosipho afr...
Feature 1             
NP_347734    171 MDYKV 175 Clostridium acetobutylicum ATCC 824
WP_012002060 140 LYYKI 144 Pseudothermotoga
ABS60860     142 RNYKL 146 Fervidobacterium nodosum Rt17-B1
EHR34845     173 KQYNL 177 Helcococcus kunzii ATCC 51366
NP_228729    142 RTYLI 146 Thermotoga maritima MSB8
WP_021278715 252 RYYRI 256 Bacteriovorax sp. DB6_IX
BAI81060     221 RNYQL 225 Deferribacter desulfuricans SSM1
WP_021271146 251 KNYKR 255 Bacteriovorax sp. BSW11_IV
AGH95779     221 NNYLM 225 Bdellovibrio exovorus JSS
ACJ74582     140 KAYSL 144 Thermosipho africanus TCF52B

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