Conserved Protein Domain Family
transpos_IS4_2

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NF033591: transpos_IS4_2 (this model, PSSM-Id:411213 is obsolete and has been replaced by 468100)
IS4 family transposase
Statistics
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PSSM-Id: 411213
Aligned: 40 rows
Threshold Bit Score: 222.923
Created: 19-Oct-2021
Updated: 25-Oct-2021
Structure
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Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
WP_011050083  39 LTLIDIARAWPGATRVRAPlkACDRLLCNRTLQAERSMIERDMAHWLLRgdQPVIVIDWSDLKPDKSWCLLRAAVPIGGR 118 Gammaproteobact...
WP_006669216  38 VNLMEIATVFANPVQISSNyqRLQRFFRQFKFDRAEIARFVVSLIDIPq--PWTLSLDRTCWSFGQTHFNILMLAVVHEG 115 Microcoleaceae
WP_012308481  38 VNLAKLATVWGGNAAEESNykRMQRFFQSFDVNMDKIARMVMNIAAIPq--PWVLSIDRTNWSLGTTDFNILMLCVVHEG 115 unclassified Sy...
WP_012166586  38 VNLSELALGFDGSAQSDSKykRLQRFFRGFDIEYETIAKLVIDWMQIPq--PWVLSIDRTTWELGTHCFNILSIGVVHEG 115 Acaryochloris m...
WP_012167352  38 VNLSELALGFEGSAQSDSKykRLQRFFRGFDLEYATIAKLVIDWMQTPq--PWVLSIDRTTWEFGTHCFNILSIGVVHEG 115 Acaryochloris m...
WP_076612069  38 CNLSSASKALPIKCLPQSFyrRIQRFFAGQYFDYRQISQLIFNIFSFD---KVQLTLDRTNWKWGKRDINILMLAIVYRG 114 Acinetobacter
WP_100607965  38 CNLSSASKALPIKCLPQSFyrRMQRFFAGQYFDYRQISQLIFNMFSFD---QVQLTLDRTNWKWGKRNINILMLAIVYRG 114 Acinetobacter
WP_011212682  37 VNLTEIACGFSSPAKQDSRytRIKRFFREFKIDFSSVSVWVIHCFGLSGq-ALYLSMDRTNWRWGKKDINILMLSVVYKG 115 Legionella pneu...
WP_032528339  48 VSLHKLAAAMPTSVERDSNlrRIQRFIAKYALNFDLVAQMIYSLLPVKt--GLVLSMDRTNWKFGDFNINILMLGVAYKG 125 Bacteroides fra...
WP_076611089  43 VVLYTLKTHVHLPGSFDTRyqRLRRFVRFEFPDHFFVRFALFSLPD-G---ELNLILDRTNWKLGKQDVNILLLSAVWDS 118 Deinococcus des...
WP_011050083 119 TLTLLDMVVAGKQQg--SPGAEKRFLQQLRRMIPDDVRPILVTDAGF--RTPWFRAVSAMgWDWVGRLRGRTQVKPQDvp 194 Gammaproteobact...
WP_006669216 116 IAFPLLWTMLDKKgn-sNSGERMDLFDRFEALFPDVEVACLTADREFvgRDWLSYLLIDPeVPFRLRIRHSELISPKLg- 193 Microcoleaceae
WP_012308481 116 IGYPLMWTMLKKKRgnsNSTERMDLLERFETLFPNIEIAYLTGDREFigKPWLSYLMLDKpIPFRLRLRQTDKISKGKg- 194 unclassified Sy...
WP_012166586 116 VAFPLLWWMLQKKgn-sSSDERMQFIDALLHICPDPQIRCLCGDREFigQLWVRYLRLAPlLPFRLRIRATDKIERQ--- 191 Acaryochloris m...
WP_012167352 116 VAFPLLWWMLQKKgn-sSSDERMRFVEALLHICPDLQIRYLCGDREFigQLWVRYLRLAPlLPFRLRIRATDKIERQ--- 191 Acaryochloris m...
WP_076612069 115 IAIPIVWTLLNKRgn-sDTKERIALIQRFISIFGKDRIVNVFADREFigEKWFTWLIENd-INFCIRVKKNFIVTNHL-- 190 Acinetobacter
WP_100607965 115 IAIPILWTLLNKRgn-sDTKERIALIQRFIAIFGKDRIVNVFADREFigEQWFTWLIEQd-INFCIRVKKNFIVTNHL-- 190 Acinetobacter
WP_011212682 116 IAIPLFWTLLAKGgn-sDTRERIEIVQRFITKFGKSMIAGLLADREFvgDNWFAWLLTEk-IPFCIRIKNNVITTNSR-- 191 Legionella pneu...
WP_032528339 126 IAFPLMFSLLPKKgn-sNWKERKAIVERFVRLFGSECIDSLVADREFvgKDWIGWLNRNh-IRYYIRIRQNFWLVKPSt- 202 Bacteroides fra...
WP_076611089 119 FSLPLVWALLPHGgs-sSHQERFAHLLRFVRCCSERHIGSLLADREFigKSWFTFLDQHg-IAPCIRLPATATIGTGK-- 194 Deinococcus des...
WP_011050083 195 ddaaqwidSRRLHALASNRACELPPMqaNRSDPLDCRLVLYAKTRLGRQQrnrrspakvsrassslkaaarEREPWLIVA 274 Gammaproteobact...
WP_006669216 194 --------GTRRSGERMFDSLRPGEFrqLSGRRWVWGRQVYVIGSRLAD-----------------------SGELLILI 242 Microcoleaceae
WP_012308481 195 --------QPAIAGSHLFRSLAIGETriLSGKRWVWGRQVYVMGTRLDPKrra----------------hkNEDEFLIII 250 unclassified Sy...
WP_012166586 192 --------GKALQTKVVFAHLQVGQRqrLKGECRVWGQPVAVEGLRLED------------------------GALLVVI 239 Acaryochloris m...
WP_012167352 192 --------GKALQTKVVFAHLQVGQRqrLKGDCRVWGQPVAVEGLRLED------------------------GALLVVI 239 Acaryochloris m...
WP_076612069 191 --------AKNHKISDLFRHLQVGQTecRKRRIWVGRVKLYISALRLED------------------------GELLLVV 238 Acinetobacter
WP_100607965 191 --------GKNHKISDLFRHLKVGQIecRKRRILVGRVKLYISALQLEN------------------------GELLLVV 238 Acinetobacter
WP_011212682 192 --------GLEVSIDALFYDLKSGEQriLQGLRKLWRQKIYLSALRLAD------------------------GELLIVA 239 Legionella pneu...
WP_032528339 203 --------GERIRAWWLFNSLKVGQErfYYKLFLHKGEYVYLAGSRIKNSd--------------------GVPELQILI 254 Bacteroides fra...
WP_076611089 195 -----------LPVS--------------------YGVSSRLCATKNTA------------------------DEVLYLA 219 Deinococcus des...
WP_011050083 275 SPQLqapsakhLVNLYARRMQIELAFRDLKSHryGQAMEDSLTRRGERLQILLLLNTLATFASWLAGlgcEATGIAQWLS 354 Gammaproteobact...
WP_006669216 243 TNACpe----tALPDYARRWGIENLFGALKTR--GFCLESTHFKDPERLSRLLALLSLAFTWAMKVG---LWIHQGSPIP 313 Microcoleaceae
WP_012308481 251 TTHDpq----nALADYRRRWGIETLFGALKTR--GFCLESTHFTDKVRLSKLLALLAIGFVWAMQAG---LWRHTQKPIR 321 unclassified Sy...
WP_012166586 240 GPTQdd----qLIEDYALRWGIETLFGIFKTR--GFCLESTHFTEVERLRKLFALLTLALCWAMKTG---LFLHQLKPIA 310 Acaryochloris m...
WP_012167352 240 GPTQdd----qLIDDYALRWGIETLFGIFKTR--GFCLESTHFTEAERLRKLFALLTLALYWAMKTG---LFLHQLKPIA 310 Acaryochloris m...
WP_076612069 239 SPMFna----sAIRDYALRWEIETLFSCLKGR--GFNLENTRLTDPRRVKKLIAVLAIGFCWCYLTG---EWQHDRKKAI 309 Acinetobacter
WP_100607965 239 SPQFna----nAIQDYALRWEIETLFSCLKGR--GFNLENTRLTDPRRVKKLIAVLAISFCWCYLTG---EWQHDQKKAI 309 Acinetobacter
WP_011212682 240 TDHLmy----ePIEHYALRWEIETLFSCLKGR--GFNFEDTHMTQPDRIEKLLVLLTIAFCWAHKTG---EWRHVQK-AI 309 Legionella pneu...
WP_032528339 255 CFKRpe----kGVDTYKRRWEIETAFRAMKSS--GFNIEDTHLRDTERIARLLAMVCIALVWAYLVG---EHKDENVKPI 325 Bacteroides fra...
WP_076611089 220 YRGYas----vNLRRYAQRWQAENLHSALKTR--GFNLEDTGLTQAERVSTVLTCVSAAFIWAYVTC---QVLAAKQPVK 290 Deinococcus des...
WP_011050083 355 PRSStr-klYSTLRVGRQALARRWPMEPVSRWLERLRTLPEAVREQ 399 Gammaproteobacteria
WP_006669216 314 -LKAhgrrsQSLFRTGFDFLRRTFSNLP--LFSGRFHQALQLLSCT 356 Microcoleaceae
WP_012308481 322 IIKAhgrraRSLFRYDFDLLRRFFTASPQSLLGSEFHP-IQLLSCT 366 unclassified Synechococcus
WP_012166586 311 -LKThgrraKSLFRLGFDHLRQMILNPS-PDNEREFLKALQLLSCT 354 Acaryochloris marina
WP_012167352 311 -LKTherraKSLFRLGFDHFRQMILNPS-PGNEREFLQSLQLLSST 354 Acaryochloris marina
WP_076612069 310 KIKKhgrlsVSLFRYGLDYVQMAILRLIGFGKKEEFKKVLAILRKK 355 Acinetobacter
WP_100607965 310 KIKKhgrlsMSLFRYGLDYVQMAIQRLIGFGKKEEFKEILAILRRQ 355 Acinetobacter
WP_011212682 310 KIKKhgrkgVSFFRYGLDLLRDAALNGCQFIR-HSFSDILGFLCIS 354 Legionella pneumophila
WP_032528339 326 KTLKhgrkaKSLVKYGLEEISNVLFRPIYVPK----FDVFKFLSCT 367 Bacteroides fragilis
WP_076611089 291 -RKEdgyraVSVFRLGLDHLQDLLLHPSLSSWRALQALMPSFDW-- 333 Deinococcus deserti
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