Conserved Protein Domain Family
DUF4998

?
pfam16389: DUF4998 (this model, PSSM-Id:406722 is obsolete and has been replaced by 435316)
Domain of unknown function
This family around 200 residues locates in the N-terminal of some uncharacterized proteins in various Bacteroides and Parabacteroides species. The function of this family remains unknown.
Statistics
?
PSSM-Id: 406722
Aligned: 21 rows
Threshold Bit Score: 204.464
Created: 11-May-2020
Updated: 7-Aug-2020
Structure
?
Aligned Rows:
Sequence Alignment
?
Format: Row Display: Color Bits: Type Selection:
jgi:Phep_0713           23 CEKMDATYKDFLNGGEIVYNGKP--ELLQVFSGNKRVKLKWYIVSDPKITSAKIYWNNPAhiegepvipgqrpagrDSVV 100 Pedob...
WP_012780681            42 CDKMDDIQRKYAEKEEQVYLGKV--DSIKYFSGFGRAKITWYIGSDPKVEKTIIYWNRRK----------------DSIV 103 Pedob...
WP_008583541            21 CDKMNDIQKKYADKAEQVYLGRV--DSVQCFPGVGRAKMVWYMNADPKIERTIIYWNSRQ----------------DSLV 82  Niabe...
Q8A3I9                  20 CESMDATYKDFVKDGPIMYLTRLskDSITVRNGWERVLISFPIVKDGRSTKIALALNQS-----------------DTVR 82  Bacte...
PRJNA61269:NIASO_14335  21 CTRSDEYYRDYLKNGEIYYPGRI--DSLSIIPGDRKAVLRFRMTTDPKIQTIKAFVRNSLsp------------nqTVLT 86  Niabe...
Q8A3U8                  23 CTKMD-EYLKYTDGKEILYTGIP--DSIAMYSGYNRVVFRGVLASDPKIAKIKIYWNLKQ----------------DSLE 83  Bacte...
Q8A089                  20 CGDMYDVHEKYLKMGEETYLGIA--SDLEANSGFNRIELKWKLNADPRINASIISWEGCE----------------TPIE 81  Bacte...
CDC97660                20 CKDQDDIYKQWVVPGGSVYPEKA--NGLNAKLGYKRIQLRWATPKDPSVTKAVITWDNGD----------------QTKE 81  Prevo...
CDA76753                16 CENMEDVHKKYIADGEIIYRVKP--TTIKSYSGYNQAKLTWNLVCPKLVTQCRIEEN-------------------NSLL 74  Bacte...
Q8A2Z6                  19 CNGMLDGIQPYLDEGEKIYVGKL--DSLKAFTGKNRIKIEGKMMYGVNQVKCVISYKDPItl------------eeKFKE 84  Bacte...
jgi:Phep_0713          101 LAIQRGS-GTDSVQTFIDRLKEGIYTFSVFMYDDKG-HSSVKSEVIGDVYGDNYQASI-TNRPLDMPQLNilnGKSDLY- 176 Pedob...
WP_012780681           104 KEFVRKGaGVQKDSVIVENLPEGSTLFEFRNVNNRG-ETSLYSSSTINVWGSEFADGL-RARNLTAFNFDy--AKSLFT- 178 Pedob...
WP_008583541            83 VPFNRTAlGGQRDSVYLDSLPEGSTLLEFKNVNSKG-ETSLITIAGATVWGEHFAGSL-TARIINAFDYDy--TQSRYN- 157 Niabe...
Q8A3I9                  83 YELAKNK----RTDILLENMREGSIIFSAWLEDDEL-NKSLATDFTGTIYGTQYQSYL-LNRSIVSKSMQ----SGNLV- 151 Bacte...
PRJNA61269:NIASO_14335  87 FPVTQGD-YGKIKEYALDNLEEATYTIDIRTFASEK-DSSRAVTASQFIYGQSYISTL-TNRSFLKFAGP----DATVN- 158 Niabe...
Q8A3U8                  84 QDIRREG-NDNVLIIPIP-LEEGTYNFEMHTYDKDGlHPSVPFNLTGTSYGDSYKDGL-VNRLVKKVEKI----EDDVT- 155 Bacte...
Q8A089                  82 VPISADRdINDYISKIID-LPEGKYIFSIINKSETG-KESLIQTISGEVYGSSYQAGL-SAQGINSMEAT---LSKGVT- 154 Bacte...
CDC97660                82 LNYADYA-GQDSIRLEIDQLKEQSYTFNIVNYDKEG-NQSMQSENTASPYGDIWLATH-SERTIKSAEIP---SGTNAN- 154 Prevo...
CDA76753                75 AELHVVYeDTVRMECILNNLEEKTHTFSIYTLDAEG-NTSLKSEIIVDVYGAKYEANLrTNISLKSVWRKa-dNSNQVL- 151 Bacte...
Q8A2Z6                  85 FPIERTE-PRETFEFMLENLTEGQYDFSIVTYDPKN-NTSIPTEVSAYAYGELYQQAL-TNRILHSISPE----QKEIVn 157 Bacte...
jgi:Phep_0713          177 ------------IPWYGVAQQA--VR---------IDLIYTNTAG-QVKTVQKKKIpnpadarrgmiwLDRDTLFNFKda 232 Pedob...
WP_012780681           179 ------------LNLSPSTRGDsvIY---------SEIVYKDKAG-AEKTVRIERA------------TVEVQLPNFP-- 222 Pedob...
WP_008583541           158 ------------LSLLKTFPGDsvVY---------SQISYTTNSN-TVQTLTINRG------------DSAVALTDFP-- 201 Niabe...
Q8A3I9                 152 ------------IKYSMLLDSTl-VA---------SRLTWNKGGE-ETTKISYYNK------------EGQDVLEDFT-- 194 Bacte...
PRJNA61269:NIASO_14335 159 ------------VPYAVFAREPnlPRlgnfypmqfTEVNYVTTIG-DTVTVRITPY------------EEVAQMGGIK-- 211 Niabe...
Q8A3U8                 156 ------------IDWSPAEPTA--LY---------TMVHYTDNSG-KVQELKIENS------------EEETVLKDYK-- 197 Bacte...
Q8A089                 155 ------------IKWAPMEGCTk------------TMFTYTNNEG-SEKTITLMEG------------ATTSIIPDAV-- 195 Bacte...
CDC97660               155 ------------ITLDFGTNEM--VA---------TKFRYLNNDGeWVVTDPVPSN------------VASVVLENAK-- 197 Prevo...
CDA76753               152 ------------IGLSEQSSSKv-VK---------TRVYYKNVDG-KEAMQEVKTG------------EKEIVLEQVA-- 194 Bacte...
Q8A2Z6                 158 esgqseriwaakLNWNISRGDGl-VG---------CNLEYERQDG-TLGSKYISVD------------ETTTELDNFK-- 212 Bacte...
jgi:Phep_0713          233 PGAKVRYRTAYLPE 246 Pedobacter heparinus DSM 2366
WP_012780681           223 DAGEFKFRTVFFPP 236 Pedobacter heparinus
WP_008583541           202 PGGSFQLRTIFFPP 215 Niabella soli
Q8A3I9                 195 -GDSFIMETLYAPQ 207 Bacteroides thetaiotaomicron
PRJNA61269:NIASO_14335 212 NPSIIKYRTVYKPT 225 Niabella soli DSM 19437
Q8A3U8                 198 SMTKFDVQTYFLPD 211 Bacteroides thetaiotaomicron
Q8A089                 196 LDTEFKVTSYFKPS 209 Bacteroides thetaiotaomicron
CDC97660               198 VGTRYEYASGYCPV 211 Prevotella sp. CAG:474
CDA76753               195 EDSYFKLQDVYMPV 208 Bacteroides sp. CAG:530
Q8A2Z6                 213 ANGILRYNSIYKPT 226 Bacteroides thetaiotaomicron
| Disclaimer | Privacy statement | Accessibility |
NCBI Home NCBI Search NCBI SiteMap