3WTF


Conserved Protein Domain Family
PAXX

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pfam15384: PAXX (this model, PSSM-Id:405963 is obsolete and has been replaced by 434684)
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PAXX, PAralog of XRCC4 and XLF, also called C9orf142
PAXX is a set of eukaryotic proteins that belong to the XRCC4 superfamily of DNA-double-strand break-repair proteins. PAXX interacts directly with DSB-repair protein Ku and is recruited to DNA-damage sites in cells thus functioning with XRCC4 and XLF to bring about DSB repair and cell survival in response to DSB-inducing agents.
Statistics
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PSSM-Id: 405963
Aligned: 10 rows
Threshold Bit Score: 270.859
Created: 21-May-2020
Updated: 7-Aug-2020
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
3WTF_A        10 LCTLP--PGPEPPRFVCYCEGEESGEGD-RGgFNLYVTDAAELWSTCFTP----------DSLAALKARFGLSAAEDITP 76 
Q9BUH6         8 LCTLP--PGPEPPRFVCYCEGEESGEGDrGG-FNLYVTDAAELWSTCFTP----------DSLAALKARFGLSAAEDITP 74  human
Q8K0Y7        10 LCILP--PGSGSPRLVCYCERDSGGDGDrDD-FNLYVTDAAELWSTCFSP----------DSLARLKARFGLSGAEDIHS 76  house mouse
XP_003473015  10 LCTLP--PGPGPPRFVCYCEPESSEASGlGV-FHLHVTDGAELWSARLPP----------DSEAARKARCGLDVDEDLAA 76  domestic guinea...
XP_006640644  14 HCTVV--PGSDGTKYICYSSRRRG------E-SNIGLTNGSEVWSTEFTP----------EMLAQHRQRFEMRTAADYIL 74  spotted gar
NP_001124069  12 LCTLL--DKNDQSKYVFFTQKLPAG-----V-INIGFTNGEDVWKTHLSE----------EILSQLFKKFSLKSTEDYTF 73  zebrafish
XP_005816762   8 FCTVV--DMKSQTRYVCYSRRKEGGGGG-RR-LCVNVTDAAAVWSADCSE----------DVLKPQGHRPALKSTEDDIL 73  southern platyfish
XP_007475463  10 LCMVPasSGQGLPRYVCYWEGPTEPAET-RA-YNLYVTDALELWNTSFTP----------ESLEKHKAQHGLDGAEDYSV 77  gray short-tail...
XP_031593284  99 YCTVL--DKTSQSKFLCYTRRKDG------M-LSVCLTDAANVWSVEYTK----------DSLKHLGQRFALKSTEDYVL 159 Oreochromis aureus
XP_028910029  11 LCVVTa-AGSGRPRYLCYCEGPEAGDEG-----------GLGVCVT--DAaemwatsfsaHSLAGHKSQQGLTPTENYAT 76  platypus
3WTF_A        77 RFRAACEQQAVALTLQED--RASLTLSG-GPSALAFDLSKVPGPEAAPRLRALTLGLAKRVWSLERRLAAAEETAVSPRK 153
Q9BUH6        75 RFRAACEQQAVALTLQED--RASLTLSG-GPSALAFDLSKVPGPEAAPRLRALTLGLAKRVWSLERRLAAAEETAVSPRK 151 human
Q8K0Y7        77 RFRAACQQQAVTVSLQED--RALITLSG-DTPALAFDLSKVPSPEAAPRLQALTLSLAEHVCNLERRLAAAEETITSPKK 153 house mouse
XP_003473015  77 RFRTACQQQAIALSLRED--RASLTLSG-PPSTLTFDLSKVPSPEAAPRLQALTLGLAERVCSLEQRLAAVEEAAISPRK 153 domestic guinea...
XP_006640644  75 KIRSACEGHLASLLVQDS--GITLELGGpGPGALTLSLTRLQDPEGREEIRGLLFSMAERLREVES-----TAQSFSPVK 147 spotted gar
NP_001124069  74 KIKCACKTGRAFVKLLED--SAVLHLGA-EATDLSLSLAKLTDSEGRMEVKDLLFKMADSLQQLDSQG---ASSSFSPGK 147 zebrafish
XP_005816762  74 RFRTSCLSGDVRVVVQHS--RAALHVGS-GPAALSVTLTRMEAPQATEELKELLFTMADTLAQLDS-----GSSAVNPFK 145 southern platyfish
XP_007475463  78 WFRVASDRHTVSLTLKDDs-SAYLTISR-GAETLTFELSKVPSLEAAPQLQALMLGLAEQACRLEKQLAALKDESPSPRK 155 gray short-tail...
XP_031593284 160 KLRAFCNSGDVSVAVHEV--GAELHLGS-SPEDLSITLSRLEGPQATDKLKELLFTMADSLTQLDSGPSN-GPPSASPVK 235 Oreochromis aureus
XP_028910029  77 RFRDACEQQTVSLTLQDDgsTVSLQLPG-GPSGLTFELPKLPDSEARPRLQALMLELAERVRGLERRLADVEAMAASPRK 155 platypus
3WTF_A       154 SPRPAGPQlFLPDPDPQRGGPGPGVRRRCPGESLINPGFKSKKPAGGVDFDET 206
Q9BUH6       152 SPRPAGPQlFLPDPDPQRGGPGPGVRRRCPGESLINPGFKSKKPAGGVDFDET 204 human
Q8K0Y7       154 NTQPAGTQ-FLPELDHQRGSSGPGVRRRCPGESLINPGFKSKKPAAGVDFDET 205 house mouse
XP_003473015 154 SPRPARPPlFLPDHDPQRGSPGAGVRRRCPGESLINPGFKSKKPASGVDFDEP 206 domestic guinea pig
XP_006640644 148 TQQRCSSD-FEPRRRHNGGGASAAVKKRLPGDSLINPGTKRKKEASGVDFDDG 199 spotted gar
NP_001124069 148 GYQKRSAE-FEPKKQHK--GPVVAVKKRLPGDSLINPGTKRKKPATGVAFDDE 197 zebrafish
XP_005816762 146 SLQRCPAD-LKPRQQQN--GAASVTKRRLPGASLINPGTKKKVQATGVAFDDE 195 southern platyfish
XP_007475463 156 KSQPGGQQlFLPDPDSRRSAPGPVMRKWMPGESLINPGFKSKKPASGVDFDAV 208 gray short-tailed opossum
XP_031593284 236 NYQRRPTE-FEPWQQQN-SAPAMTMKRRLPGSSLINPGVKKKQQATGVAFDDA 286 Oreochromis aureus
XP_028910029 156 KSCLSGQKlFMPDSERRRGGSGPGTRKRMPGESLINPGFKSKKAPSGVDFDDS 208 platypus
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