Conserved Protein Domain Family
YccC

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COG1289: YccC (this model, PSSM-Id:224208 is obsolete and has been replaced by 440900)
Uncharacterized membrane protein YccC [Function unknown]
Statistics
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PSSM-Id: 224208
Aligned: 55 rows
Threshold Bit Score: 223.061
Created: 7-Oct-2002
Updated: 23-Jan-2015
Structure
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Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
3025043   37 GGMALGNPQLGLGVGLASQLILladMGGLYSVRLKTIFGAWVGAAIAMAVG-TIVPDGWGLG----LAITGFVLFASGYL 111 Synechocystis sp. P...
15834317   1 MTFEIPFVALSLAVLFYGIQS-----NAFYTKFVAILFVVATVLEIGSLFLiYKWSYGEPLIrliiAGPILMGCMFLMRT 75  Escherichia coli O1...
15793108     --------------------------------------------------------------------------------     Neisseria meningiti...
15676115     --------------------------------------------------------------------------------     Neisseria meningiti...
17548355     --------------------------------------------------------------------------------     Ralstonia solanacearum
16765390     --------------------------------------------------------------------------------     Salmonella typhimur...
16120944   1 --MIYGIPESAISCYLIIFVMK---PDGVESMVMAVAITILVSLVVGLVFLlIHFTLEAAPLrmaaLIVSSFLFLYLGSA 75  Yersinia pestis
15804673   1 MTFEIPFVALSLAVLFYGIQS-----NAFYTKFVAILFVVATVLEIGSLFLiYKWSYGEPLIrliiAGPILMGCMFLMRT 75  Escherichia coli O1...
2506684      --------------------------------------------------------------------------------     Escherichia coli
16131907   1 MTFEIPFVALSLAVLFYGIQS-----NAFYTKFVAILFVVATVLEIGSLFLiYKWSYGEPLIrliiAGPILMGCMFLMRT 75  Escherichia coli K12
3025043  112 AVYGEQGAMVGIVTTFAFLLGAqnvstDSFEFTSLAIGGMWSLILAIFiwpfrpnqPLrqmvanNYSILGNYLRAMAAAN 191 Synechocystis sp. P...
15834317  76 HRLGLVFFAVAIVAIYGQTFPA-----MLDYPEVVVRLTLWCIVVGLY--------PT------LLMTLIGVLWFPSRAI 136 Escherichia coli O1...
15793108     --------------------------------------------------------------------------------     Neisseria meningiti...
15676115     --------------------------------------------------------------------------------     Neisseria meningiti...
17548355     --------------------------------------------------------------------------------     Ralstonia solanacearum
16765390     --------------------------------------------------------------------------------     Salmonella typhimur...
16120944  76 SKLGPVGSIIALVIAYVMTLLS-----NIPMGEVATRGLLYAWLMAVS---------P--------MLLIIGFNLFFGRA 133 Yersinia pestis
15804673  76 HRLGLVFFAVAIVAIYGQTFPA-----MLDYPEVVVRLTLWCIVVGLY--------PT------LLMTLIGVLWFPSRAI 136 Escherichia coli O1...
2506684      --------------------------------------------------------------------------------     Escherichia coli
16131907  76 HRLGLVFFAVAIVAIYGQTFPA-----MLDYPEVVVRLTLWCIVVGLY--------PT------LLMTLIGVLWFPSRAI 136 Escherichia coli K12
3025043  192 FSPDDPQAQQLVVKLRQNLLKSRQTLVASQRGLWGQSKlrelLLVLIEHTERLNKCLMLLNEIVNfhnLPQLQTVEILME 271 Synechocystis sp. P...
15834317 137 SQMHQALN--DRLDDAIS--HLTDSLAPLPETRIEREA-------LALQKLNVFCLADDANWRTQs--AWWQSCVAT--V 201 Escherichia coli O1...
15793108     --------------------------------------------------------------------------------     Neisseria meningiti...
15676115     --------------------------------------------------------------------------------     Neisseria meningiti...
17548355     --------------------------------------------------------------------------------     Ralstonia solanacearum
16765390     --------------------------------------------------------------------------------     Salmonella typhimur...
16120944 134 PQTLLRASLAERLSTVAETLRYPNAANMARVGEQLQEG----QHEHQQRALFVRIFHLRPSAEAA-----WLESAVKSSY 204 Yersinia pestis
15804673 137 SQMHQALN--DRLDDAIS--HLTDSLAPLPETRIEREA-------LALQKLNVFCLADDANWRTQs--AWWQSCVAT--V 201 Escherichia coli O1...
2506684      --------------------------------------------------------------------------------     Escherichia coli
16131907 137 SQMHQALN--DRLDDAIS--HLTDSLAPLPETRIEREA-------LALQKLNVFCLADDANWRTQn--AWWQSCVAT--V 201 Escherichia coli K12
3025043  272 DAFNALGEVCLDLGQMVLGKRRIPNtnrlqllvqaLQQQKKLQRQALTEDFNDynsltTVTQLVNHLENLIKQLEQTIQT 351 Synechocystis sp. P...
15834317 202 --TYIYSTLNRYDPTSFADSQAIIEfrqkl-aseiNKLQHAITEGQCWQSDWRi---sESEAMAARECNLENICQTLL-Q 274 Escherichia coli O1...
15793108     --------------------------------------------------------------------------------     Neisseria meningiti...
15676115     --------------------------------------------------------------------------------     Neisseria meningiti...
17548355   1 --------------------------------------------------------------------------MSISIS 6   Ralstonia solanacearum
16765390     --------------------------------------------------------------------------------     Salmonella typhimur...
16120944 205 RLLLVTSALPPTSPEAVRLELAAYCs----------DAAQAIASGDLAAP---------PHFAIEDTSDEINEIRNALIA 265 Yersinia pestis
15804673 202 --TYIYSTLNRYDPTSFADSQAIIEfrqkl-aseiNKLQHAITEGQCWQSDWRi---sESEAMAARECNLENICQTLL-Q 274 Escherichia coli O1...
2506684      --------------------------------------------------------------------------------     Escherichia coli
16131907 202 --TYIYSTLNRYDPTSFADSQAIIEfrqkl-aseiNKLQHAVAEGQCWQSDWRi---sESEAMAARECNLENICQTLL-Q 274 Escherichia coli K12
3025043  352 AELLQNPQLfsdnnsndqgKLNKVRLMPWWDPlgsnFHLNSPLLRHGLRMALGGMVGATIAHLTQIPYGFWIVITLIFVL 431 Synechocystis sp. P...
15834317 275 LGQMDPNTP----------PTPAAKPPSMVAD----AFTNPDYMRYAVKTLLACLICYTFYSGVDWEGIHTCMLTCVIVA 340 Escherichia coli O1...
15793108   1 ----------------mntSQRNRLVSRWLNSy---ERYRYRRLIHAVRLGGAVLFATASARLLHLQHGEWIGMTVFVVL 61  Neisseria meningiti...
15676115   1 ----------------mntSQRNRLVSRWLNSy---ERYRYRRLIHAVRLGGAVLFATASARLLHLQHGEWIGMTVFVVL 61  Neisseria meningiti...
17548355   7 LPRAPKLPAp--------lLYALRLVRDPHR------RYRYARYIHGTRVGLGVLLSIAVTSGLGWPHGEWATISLLIVI 72  Ralstonia solanacearum
16765390   1 -------------------MRADKSLSPFEIR-----LYRHYRIVHGIRIALAFILTFLLVRLFSIPEGTWPLITLVVIM 56  Salmonella typhimur...
16120944 266 LANADNGQD-----------LDAPKSSFFAAD----ALTNPVHQQFALKTTAAALICYLIYTALDWQDIHTAMITCYVAA 330 Yersinia pestis
15804673 275 LGQMDPNTP----------PTPAAKPPSMVAD----AFTNPDYMRYAVKTLLACLICYTFYSGVDWEGIHTCMLTCVIVA 340 Escherichia coli O1...
2506684    1 -------------------MRADKSLSPFEIR-----VYRHYRIVHGTRVALAFLLTFLIIRLFTIPESTWPLVTMVVIM 56  Escherichia coli
16131907 275 LGQMDPNTP----------PTPAAKPPSMAAD----AFTNPDYMRYAVKTLLACLICYTFYSGVDWEGIHTCMLTCVIVA 340 Escherichia coli K12
3025043  432 KPD--FSLTFQRLSNRLLGTFLGVLVMSIALKLIQDPQL-----LSWLGILAIAMGMALLRFH----YSVAVFFITAFAL 500 Synechocystis sp. P...
15834317 341 NPN--VGSSYQKMVLRFGGAFCGAILALLFTLLVMPWLDni-veLLFVLAPIFLLGAWIATSSerssYIGTQMVVTFALA 417 Escherichia coli O1...
15793108  62 GMLqfQGAIYSKAVERMLGTVIGLGAGLGVLWLNQHYFHgnllfYLTVGTASALA-GWAAVGK----NGYVPMLAGLTMC 136 Neisseria meningiti...
15676115  62 GMLqfQGAIYSKAVERMLGTVIGLGAGLGVLWLNQHYFHgnllfYLTVGTASALA-GWAAVGK----NGYVPMLAGLTMC 136 Neisseria meningiti...
17548355  73 AGLqhHGNIRKRAAERAWGTLIGALAGLLLIVQQTYLGHpp--lTYALMGIACGICAYHAIGK----GGYIALLAAITLV 146 Ralstonia solanacearum
16765390  57 GPIsfWGNVVPRAFERIGGTILGAALGLVALRLELFSLPl---mLVWCAIAMFLC-GWLALGK----KPYQALLIGITLA 128 Salmonella typhimur...
16120944 331 LGT--TGETVHKLVLRIIGCLIGALMGVLSIIFIIPHMSdi-gqLMALVFGCILVAAWVSCGS----ERIAYAGVQVGLA 403 Yersinia pestis
15804673 341 NPN--VGSSYQKMVLRFGGAFCGAILALLFTLLVMPWLDni-veLLFVLAPIFLLGAWIATSSerssYIGTQMVVTFALA 417 Escherichia coli O1...
2506684   57 GPIsfWGNVVPRAFERIGGTVLGSILGLIALQLELISLPl---mLVWCAAAMFLC-GWLALGK----KPYQGLLIGVTLA 128 Escherichia coli
16131907 341 NPN--VGSSYQKMVLRFGGAFCGAILALLFTLLVMPWLDni-veLLFVLAPIFLLGAWIATSSerssYIGTQMVVTFALA 417 Escherichia coli K12
3025043  501 ILKAIDPSvPTEYALLSR--LVCTLIGSAIALGLAFSFLRQSENLRFTQASVRMLTNLEQYFQQLIPALLGKEsinkkea 578 Synechocystis sp. P...
15834317 418 TLENVFG--PVYDLVEIRdrALGIIIGTVVSAVIYTFVWPESEARTLPQKLAGALGMLSKVMRIPRQQEVTALrt----y 491 Escherichia coli O1...
15793108 137 MLIGDNGS-EWFDSGLMR--AMNVLIGAAIAIAAAK-LLPLKSTLMWRFMLADNLTDCSKMIAEISNGRRMTRerl--ee 210 Neisseria meningiti...
15676115 137 MLIGDNGS-EWLDSGLMR--AMNVLIGAAIAIAAAK-LLPLKSTLMWRFMLADNLADCSKMIAEISNGRRMTRerl--ee 210 Neisseria meningiti...
17548355 147 IVVG-HGD-NDLLDGAWR--TLNVLVGIAIALLFSF-ALPLYATYSWRYRLADALRECAKVYASLSKAGATAG------- 214 Ralstonia solanacearum
16765390 129 VVVG-APA-GDMDTALWR--GGDVILGSLLAMLFTG-IWPQRAFLHWRIQLAHCVTAYNRVYQAALSPNLLERprl---- 199 Salmonella typhimur...
16120944 404 FLLTVLQG-FGPSTDMGV--ALDRVLGILLGNLVVYLIFSRLWPVAITDAVHVHISRALKGLTNLAALSPDAR------- 473 Yersinia pestis
15804673 418 TLENVFG--PVYDLVEIRdrALGIIIGTVVSAVIYTFVWPESEARTLPQKLAGALGMLSKVMRIPRQQEVTALrt----y 491 Escherichia coli O1...
2506684  129 IVVG-SPT-GEIDTALWR--SGDVILGSLLAMLFTG-IWPQRAFIHWRIQLAKSLTEYNRVYQSAFSPNLLERprl---- 199 Escherichia coli
16131907 418 TLENVFG--PVYDLVEIRdrALGIIIGTVVSAVIYTFVWPESEARTLPQKLAGTLGMLSKVMRIPRQQEVTALrt----y 491 Escherichia coli K12
3025043  579 eRvRNETRLAATAMQIALDRLLS-DPSTPLEKQEPALTMTNYLARLSRGFRVLISHLENssgs----npppPIKLFTEQV 653 Synechocystis sp. P...
15834317 492 lQiRIGLHAAFNACEEMCQRVAL-ER---QLDSEERALLIERSQTVIHQGRDLLHAWDAt----------wNSAQALDNA 557 Escherichia coli O1...
15793108 211 nMaKMRQINARMVKSRSHLAATS-GESRISPAMMEAMQHAHRKIVNTTELLLTTAAKLQspklngseirllDRHFTLLQT 289 Neisseria meningiti...
15676115 211 nMaKMRQINARMVKSRSHLAATS-GESRISPAMMEAMQHAHRKIVNTTELLLTTAAKLQspklngseirllDRHFTLLQT 289 Neisseria meningiti...
17548355 215 -SePLKHLNRLNALLVQLRSLMPsVSKEIEVPIERLERIQHSLRICISTLELLGTARASa-----------DAPAARATA 282 Ralstonia solanacearum
16765390 200 -dkHLQRLLNDVVKMRGLITPAS-KETRIQKSIFEAIQTINRNLVCMLELQINAHWATRashf-----vmlNAHTLRETQ 272 Salmonella typhimur...
16120944 474 ---PAALREATTVEAEITKAQEE-----LALIPFEPVQFRPSRKECARLQAILAEMGK-------------LCPVLFLPT 532 Yersinia pestis
15804673 492 lQiRIGLHAAFNACEEMCQRVAL-ER---QLDSEERALLIERSQTVIHQGRDLLHAWDAt----------wNSAQALDNA 557 Escherichia coli O1...
2506684  200 -esHLQKLLTDAVKMRGLIAPAS-KETRIPKSIYEGIQTINRNLVCMLELQINAYWATRpshf-----vllNAQKLRDTQ 272 Escherichia coli
16131907 492 lQiRIGLHAAFNACEEMCQRVAL-ER---QLDSEERALLIERSQTVIRQGRDLLHAWDAt----------wNSAQALDNA 557 Escherichia coli K12
3025043  654 QQSLENlrFSLEHQSSPAALPPMATTIKEireyhqsyqaqRITEINQKQdftptRRYLDDFNLVVEECQQIYQRLETIHS 733 Synechocystis sp. P...
15834317 558 LQPDKa--GQFADALEKYAAGLATALSRS-----------PQITLEETP------ASQAILPTLLKQEQHVCQLFARLPD 618 Escherichia coli O1...
15793108 290 DLQQTValINGRHARRIRIDTAINPELEA-----------LAEHLHYQWqg-flWLSTNMRQEISALVILLQRTRRKWLD 357 Neisseria meningiti...
15676115 290 DLQQTValINGRHARRIRIDTAINPELEA-----------LAEHLHYQWqg-flWLSTNMRQEISALVILLQRTRRKWLD 357 Neisseria meningiti...
17548355 283 DILSAQedRRIRDTLIGISRALRFGTVAR-----------LAHSRAADA-----EPAASLPGQLTAESALALRFASEVEQ 346 Ralstonia solanacearum
16765390 273 QMTQQTllT-IAHALFEGNPQPVLANTGK-----------LNDIAAELRq-----LMNEQQGDAVAETPIHGYVWLSMET 335 Salmonella typhimur...
16120944 533 EKSAS-----DVEQLR-----QLSAGSDA-----------MTLSDEQGQ------NSGSLRQELSPINLTIQQRIKRLEE 585 Yersinia pestis
15804673 558 LQPDKa--GQFADALEKYAAGLATALSRS-----------PQITLEETP------ASQAILPTLLKQEQHVCQLFARLPD 618 Escherichia coli O1...
2506684  273 HMMQQIllS-LVHALYEGNPQPVFANTEK-----------LNDAVEELRq-----LLNNHHDLKVVETPIYGYVWLNMET 335 Escherichia coli
16131907 558 LQPDRa--GQFADALEKYAAGLATALSRS-----------PQITLEETP------ASQAILPTLLKQEQHVCQLFARLPD 618 Escherichia coli K12
3025043  734 AIARFTDSPQLANG 747 Synechocystis sp. PCC 6803
15834317 619 WTAPALTPATEQAQ 632 Escherichia coli O157:H7
15793108 358 AHERQHLRQSLLET 371 Neisseria meningitidis Z2491
15676115 358 AHERQHLRQSLLET 371 Neisseria meningitidis MC58
17548355 347 LRSEFLATAPRWNI 360 Ralstonia solanacearum
16765390 336 ARQLELLSHLICRA 349 Salmonella typhimurium LT2
16120944 586 LLGI---------- 589 Yersinia pestis
15804673 619 WTAPALTPATEQAQ 632 Escherichia coli O157:H7 EDL933
2506684  336 AHQLELLSNLICRA 349 Escherichia coli
16131907 619 WTAPALTPATEQAQ 632 Escherichia coli K12
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