Conserved Protein Domain Family
LC_FACS_euk1

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cd17639: LC_FACS_euk1 
Eukaryotic long-chain fatty acid CoA synthetase (LC-FACS), including fungal proteins
The members of this family are eukaryotic fatty acid CoA synthetases (EC 6.2.1.3) that activate fatty acids with chain lengths of 12 to 20 and includes fungal proteins. They act on a wide range of long-chain saturated and unsaturated fatty acids, but the enzymes from different tissues show some variation in specificity. LC-FACS catalyzes the formation of fatty acyl-CoA in a two-step reaction: the formation of a fatty acyl-AMP molecule as an intermediate, and the formation of a fatty acyl-CoA. This is a required step before free fatty acids can participate in most catabolic and anabolic reactions. Organisms tend to have multiple isoforms of LC-FACS genes with multiple splice variants. For example, nine genes are found in Arabidopsis and six genes are expressed in mammalian cells. In Schizosaccharomyces pombe, lcf1 gene encodes a new fatty acyl-CoA synthetase that preferentially recognizes myristic acid as a substrate.
Statistics
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PSSM-Id: 341294
Aligned: 22 rows
Threshold Bit Score: 755.592
Created: 30-Jan-2017
Updated: 2-Oct-2020
Structure
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Aligned Rows:
 
Feature 1:putative active site [active site]
Evidence:

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1                                                                                        
NP_001038593 123 GEYRWMSYEQVFKEVNAFGSGLAALGqk--pMKNIAIFcETRAEWIIAAQACFmYNFPLVTLYSTLggPAIAHGLNEAEV 200 zebrafish
P47912        95 TPYITMTYEEMICVMHDIGRGLIKIGvkpngENKFHIFaSTSHKWMKTFLGCMsQGIPVVTAYDTLgeSGLIHSMVETDS 174 Saccharomyces c...
BAE65110     108 SGYSYKSFVEYEQMALQLGAGLKKLGle--tGDKIHLYgATSENWLAMSHGAAsQSLTIVTAYDTLgeEGLKHSLVQTSS 185 Aspergillus oryzae
CAG29795     118 PGRRNISYKQLWETVENFSKGLCEIGlq--eRQCLALFeETRWEWYASLLSAWcHNMIVATVYANLgeDALRYALREAQC 195 Trypanosoma brucei
AAN74819      89 GPYNYLSYSQYELLAIQIGSGLRKLGls--sSNKVYLFgTTSANWISMSHGCAsQGIPIVTGYDTLsaTDIQHSLSQTHA 166 Gibberella moni...
XP_003857988 118 PGQKTMSYARFWQNIVNFGRGLHEIGlt--kGNTVSVYeETRWQWLCTMYSCWsQGLLVSTVYANLgeDALQYALDETQC 195 Leishmania dono...
XP_003857867 130 DEVVYVTYSEMEERIFHFGAGLAALGvt--aNGNVSIYlDTCVEWLIGIYGIWsCSAVAATVYANLgeAALAHALHETES 207 Leishmania dono...
XP_003857864 115 SAQCDLTYRELWHAVTGFSRGLAELGle--kRANVTIYeETRWEWLASIYGIWmQDMVAATVYANLgeDALFYALRETEC 192 Leishmania dono...
XP_003857862 115 NEPTYITYAEVWSRLVAFGRGLVELGlq--kGSHVALYeDTRWEWLVTMLGVWtQEMIGVTVYANLgeDALLYALKEATC 192 Leishmania dono...
NP_014962     95 SHYHYNSFDQLTDIMHEIGRGLVKIGlkpndDDKLHLYaATSHKWMKMFLGAQsQGIPVVTAYDTLgeKGLIHSLVQTGS 174 Saccharomyces c...
Feature 1                                                                                        
NP_001038593 201 SHIITSKdlletklksifievprlchvivvddklstss----------------eyprgisihsmasvkelgarpenask 264 zebrafish
P47912       175 VAIFTDNqllsklavplktaknvkfvihnepidpsdkrqngklykaakdavdkikevrpdikiysfdeiieigkkakdev 254 Saccharomyces c...
BAE65110     186 VAMFCDPslipsvanvlkdvksikhiiwnshfapkqadl--------------erlkteyedinvisfedlrtlgeqnpv 251 Aspergillus oryzae
CAG29795     196 GCIICNGknvpvlldkvklkemgnpvviylddlptnvd-----------------imdlrvykwstvvemgaksekaqln 258 Trypanosoma brucei
AAN74819     167 EVIYLDPhllgtasialensqvktviintgsifsggydi--------------dqfrnehpqfnvityeeliqlgrhnlk 232 Gibberella moni...
XP_003857988 196 NAIVCNGskvkdvltmfkvieapkgtkviyldelppsv----------------tseeyelyawsdvmargknseancri 259 Leishmania dono...
XP_003857867 208 QAILCGSanvanvlklmkngvmpqvpiiyvgtlpasld----------------thgvqvvsfkqvemigaahleggaak 271 Leishmania dono...
XP_003857864 193 EAILCNGknvpnllrgvgsgafpactliyldnlpaagc----------------aelhgcrvlswedvvalghgagahhg 256 Leishmania dono...
XP_003857862 193 EALVCNGknvgklislmnqygvhnatiiyldalpsn--------------------lnteshkvvawadvlakgtpstap 252 Leishmania dono...
NP_014962    175 KAIFTDNsllpslikpvqaaqdvkyiihfdsissedrrqsgkiyqsahdainrikevrpdiktfsfddilklgkescnei 254 Saccharomyces c...
Feature 1                       #                                            ##                  
NP_001038593 265 pknppCSSDVAVIMYTSGSTGVPKGVMISHSnIISGITGMTHRipk----lveDDTYIGYLPLAHVlELSAEMVCLAHGC 340 zebrafish
P47912       255 elhfpKPEDPACIMYTSGSTGTPKGVVLTHYnIVAGIGGVGHNvigw---igpTDRIIAFLPLAHIfELTFEFEAFYWNG 331 Saccharomyces c...
BAE65110     252 epvppSPEDLCCIMYTSGSTGPPKGVPLTHAnVIAATAGINTIvgpy---igpSDALLTYLPQSHIlEFMFENLCLIWGG 328 Aspergillus oryzae
CAG29795     259 iptceNCDDSALIMYTSGTTGDPKGVVHTHGsLASGVYALSIRlsevfgdprdDETYCSYLPLAHImELAVLSILMLRGC 338 Trypanosoma brucei
AAN74819     233 epipvKSSDLFCIMYTSGSTGLPNGCCITHEnFLAGITGLLGGiddf---vsdQERVLAYLPLAHIfEMALENLVMYIGG 309 Gibberella moni...
XP_003857988 260 psgaeSKDELALIMYTSGTTGNPKGVMHTHGsLYCGCMTISQRindllgemkeQEWYCSYLPLAHImELAVTSVLMMRGV 339 Leishmania dono...
XP_003857867 272 gtgplNDDDLALIMYTSGTTGDPKGVMHTHRtLAAGLHTLEPRvvdllgqphsDDVYLSYLPMAHImEFTITNLFIFRGA 351 Leishmania dono...
XP_003857864 257 aappeDNESVALIMYTSGTTGDPKGVMHTHGsIVAGILTMDDWlysvi-khrpDDVYLSYLPLAHImEFGVVNILLARRA 335 Leishmania dono...
XP_003857862 253 ykvqdNKDEEVLVMYTSGTTGNPKGVVHTIGaLTQGALGLEERlteli-gkeeNESYVAYLPAAHIfEFTCENIMLLRGA 331 Leishmania dono...
NP_014962    255 dvhppGKDDLCCIMYTSGSTGEPKGVVLKHSnVVAGVGGASLNvlkf---vgnTDRVICFLPLAHIfELVFELLSFYWGA 331 Saccharomyces c...
Feature 1                                           # ##  #                      ##              
NP_001038593 341 RIGYSSPqtlsdqstkikkGSRGDISVLRPTLMAAVPEIMDRIyknvmlrveQMSGFQRTLFLLAYnykmeqla-----m 415 zebrafish
P47912       332 ILGYANVktltp---tstrNCQGDLMEFKPTVMVGVAAVWETVrkgilakinELPGWSQTLFWTVYalkerni------- 401 Saccharomyces c...
BAE65110     329 TMGYGNPrtlsd---asmrNCKGDIREFKPTILVGVPAVWESVkkgvlnnlnKNNLIVRGMFWGAMaaknflmttgfpgh 405 Aspergillus oryzae
CAG29795     339 LIGFGSPrtit----ntfsKPHGDLVEYRPFVLSAVPRVFDTIkknveamlpSPGSIKRTVFERGYqarlkalr-----d 409 Trypanosoma brucei
AAN74819     310 TLGYGNPktltd---aslrECNGDMVEFKPTIMVGVPQIWETIrkavlsklnCSGFVAKTVFWTAMsfksfavry----s 382 Gibberella moni...
XP_003857988 340 IIGYGSPrtlm----dtfaKPYGDLTAYRPFVFVAVPRVFDSMrravedklpPPGSMKRKIFDKAYqarlkalk-----n 410 Leishmania dono...
XP_003857867 352 FIGFGTPrtlt----dttaRPHGDLLTFNPSMLAGVPRIFDTLkkaveaklpPVGTLKRQVFDHAYqsrlaalk-----k 422 Leishmania dono...
XP_003857864 336 HVAFGTPrtlt----dataRPHGDFTQFRPTLLIGVPRIFDTLkkaveaklpPVGTLKRQVFDHAYqsrlaalk-----e 406 Leishmania dono...
XP_003857862 332 LICFGTPrtlt----dtyaRPCGDLRAFNPFFFIGVPRIFETIkkaveaklpPVGTLKRQVFDHAYqsrlaalk-----e 402 Leishmania dono...
NP_014962    332 CIGYATVktlts---ssvrNCQGDLQEFKPTIMVGVAAVWETVrkgilnqidNLPFLTKKIFWTAYntklnmqrl----h 404 Saccharomyces c...
Feature 1                                                          ######                        
NP_001038593 416 gystplcDKLVFRKvralLGGRLRVLLSGGAPLSAATQRFMnicfCCPVGQGYGLTETcGAGTISHLWDysTGRVGAPLV 495 zebrafish
P47912       402 -pcsgllSGLIFKRireaTGGNLRFILNGGSAISIDAQKFLsn-lLCPMLIGYGLTEGvANACVLEPEHfdYGIAGDLVG 479 Saccharomyces c...
BAE65110     406 svgssllDAVVFKKlkdaTGGRLRIMMNGGGPISKDTQKFLsm-aIAPMISGYGLTETsAMGALNDPMAwnPDALGEIPA 484 Aspergillus oryzae
CAG29795     410 gketpylNEKVFNKvrqaTGGNVRLYFSGGAPLSPATQEFInv-vLGTVIQGWGLTETvCCGGTQFPGSleSESIGRMID 488 Trypanosoma brucei
AAN74819     383 lpgkgvfDDLVFGRvrqmTGGRLRYILNGSSGIADSTKEFLsl-iVAEMLTGYGLTETcANGALSSPFEqtTSAIGSTSP 461 Gibberella moni...
XP_003857988 411 gcdtpffNKRVFANarkvMGGRVYAMLSGGGPLSESTQEFInv-vFGMVIQGWGMTETvACGGIQRTGNleYNCVGQVLK 489 Leishmania dono...
XP_003857867 423 gkdtpywNEKVFAApravLGNRLRIMLSGGGPLSAATHEFVnv-vFGRVVIGYGLTETiCVGAIQIPGDteTNVTGLMEP 501 Leishmania dono...
XP_003857864 407 gkdtpywNEKVFSLpraaLGGRVRAFLSGGGPLSESTQEFVnv-vFGCIVNGWGLTETvCIGAIQRLGDltPSAVGQVLC 485 Leishmania dono...
XP_003857862 403 gkdtpywNEKVFSLprriLGSKVRGICCGGAPLSDKTQEWLsvvlGRPVAQGYGMTESvCNASVQRSGEl-KCEVGQLLH 481 Leishmania dono...
NP_014962    405 ipgggalGNLVFKKirtaTGGQLRYLLNGGSPISRDAQEFItn-lICPMLIGYGLTETcASTTILDPANfeLGVAGDLTG 483 Saccharomyces c...
Feature 1                                                                      #            #  # 
NP_001038593 496 CCELQLKDwieggyh-stdlpcPRGEILVGGPSITMGYYKNTHKTSEdffvdkkgQRWFCTGDIGEIh-gDGCLKIIDRK 573 zebrafish
P47912       480 TITAKLVDvedlg----yfaknNQGELLFKGAPICSEYYKNPEETAAaf----tdDGWFRTGDIAEWt-pKGQVKIIDRK 550 Saccharomyces c...
BAE65110     485 SIEVKLVDfadagy--ftksnpPQGEIFIRGGSVSKGYWDNEEETKAay----teDGWFMTGDIGEFd-kNGHLKIIDRK 557 Aspergillus oryzae
CAG29795     489 TVELRLLDtpeyrh---tdkpePRGEILLRGPFLFKEYYKQKALTEEvi----dsEGWFHTGDVGCVs-kNGTLRIIGRV 560 Trypanosoma brucei
AAN74819     462 AIDVKLVSipelgyftdadagpCQGEILVRGPAVFKGYFNNPQGTEKaf----apGGWFKTGDIGEFd-dRGHLKIIDRI 536 Gibberella moni...
XP_003857988 490 TAEVQLLDtdefkh---tdqpePRGEVLLRGPFLFKGYYKQPEQTREal----ddDGWLHTGDVASIa-pNGTMRIVGRV 561 Leishmania dono...
XP_003857867 502 GQEIKLLDideykh---tdtpePRGEMLSRGPYLFKGYYKQPELTREvl----deDGWFHTGDVGSFt-aDGKMRIVGRV 573 Leishmania dono...
XP_003857864 486 SEQLKLLDideykh---tdtpePRGEICLRGPFLFKGYYKQPELTREvl----deDGWFHTGDVGSId-sEGRVSIVGRV 557 Leishmania dono...
XP_003857862 482 GVEARLLDtehykh---tdkphPRGELLLRGRFVFKGYYKQPELTEQsi----lpGGWLRTGDVAEMeaeTGQMRIIGRV 554 Leishmania dono...
NP_014962    484 CVTVKLVDveelg----yfaknNQGEVWITGANVTPEYYKNEEETSQal----tsDGWFKTGDIGEWe-aNGHLKIIDRK 554 Saccharomyces c...
Feature 1               ####                                                                     
NP_001038593 574 KDLVKlqAGEYVSLGKVEAALKNCP--LVDNICAYANSdesYVIGFVVPNQKqllalaerk------rvrglweeLCNNP 645 zebrafish
P47912       551 KNLVKtlNGEYIALEKLESIYRSNP--YVQNICVYADEnkvKPVGIVVPNLGhlsklaielg---imvpgedvesYIHEK 625 Saccharomyces c...
BAE65110     558 KNLVKtqNGEYIALEKLESVYRSSP--LVGNICVYAAQdqdKPIAIIVPVEAalkklahen-----giegdtletLVHNE 630 Aspergillus oryzae
CAG29795     561 KALVKnsNGEYLALESLEATYGQNKlcTPNGVCVLVHPqrsYIAALALTTEQlimpfakeh------kirgtypeILENV 634 Trypanosoma brucei
AAN74819     537 KSLVKmqGGEYIALEKLESIYRTSQ--AILQVMVHADFeytRPIVIIMPNTKflqdksre-------lgfsdddsTLSSE 607 Gibberella moni...
XP_003857988 562 KALAKnaNGEYLALEMLESIYGTNEitVPNGVCVLVHPhrsYITIIALTNEKlvkafmeky-----kiknsefpaILDDA 636 Leishmania dono...
XP_003857867 574 KALAKncLGEYIALEALEAVYSGNEllQPNGVCVLVHPdkpYITALALTDEAratsfaakh------giegtypaLLKDQ 647 Leishmania dono...
XP_003857864 558 KALAKncLGEYIALEVLEAIYSSHPlvLNNCVCVLVDPcknYICALVLTDEGrvtrfakan------riegeypaLLEKK 631 Leishmania dono...
XP_003857862 555 KALAKncLGEYIALENLEALYCECPvvAPNGICVLVDPqqpFITALVLTDEEkamkfarah-----kfenarwpdILKDP 629 Leishmania dono...
NP_014962    555 KNLVKtmNGEYIALEKLESVYRSNE--YVANICVYADQsktKPVGIIVPNHApltklakklgimeqkdssinienYLEDA 632 Saccharomyces c...
Feature 1                             #                               
NP_001038593 646 VIEEAVLTVLTEAALTaqlERFEIPRKIRLSVEpWTPDTGLVTDSFKLKRKEL 698 zebrafish
P47912       626 KLQDAVCKDMLSTAKSqglNGIELLCGIVFFEEeWTPENGLVTSAQKLKRRDI 678 Saccharomyces cerevisiae S288c
BAE65110     631 KLKGIVLKQLQTAGRAgglKGIEIINGVVLSDEeWSPQNGYMTAAQKLQRKKI 683 Aspergillus oryzae
CAG29795     635 ELRKKVCESFQETGRAagkKSFEIVRDVRLLSDeWTPENGVLTAAAKLKRRII 687 Trypanosoma brucei
AAN74819     608 RMSAYVLDDLQDIARRsglSKIETVTGVVITDIeWTPQSGLVTPTMKLNRRFI 660 Gibberella moniliformis
XP_003857988 637 EFLKMALQSLQKTARDanrCSFEVVQGVKLLNEeWTPENGVLTAAMKLKRRII 689 Leishmania donovani
XP_003857867 648 RFQQAAAISMADTARAsnrASFECVKRVRVIDDeWTPENEILTAAQKLKRRVI 700 Leishmania donovani
XP_003857864 632 ELLEKAAASMAETARAarrRDFELVRRVSLIDDeWSPEKGQLTAALKLRRGAV 684 Leishmania donovani
XP_003857862 630 AFIAAVTASLAEIGRKagkKSFELLKRVCVLSDeWTPENNLVTASMKVRRSAI 682 Leishmania donovani
NP_014962    633 KLIKAVYSDLLKTGKDqglVGIELLAGIVFFDGeWTPQNGFVTSAQKLKRKDI 685 Saccharomyces cerevisiae S288c

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