1K3C,1II2,1J3B


Conserved Protein Domain Family
PEPCK_ATP

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cd00484: PEPCK_ATP 
Click on image for an interactive view with Cn3D
Phosphoenolpyruvate carboxykinase (PEPCK), a critical gluconeogenic enzyme, catalyzes the first committed step in the diversion of tricarboxylic acid cycle intermediates toward gluconeogenesis. It catalyzes the reversible decarboxylation and phosphorylation of oxaloacetate to yield phosphoenolpyruvate and carbon dioxide, using a nucleotide molecule (ATP) for the phosphoryl transfer, and has a strict requirement for divalent metal ions for activity. PEPCK's separate into two phylogenetic groups based on their nucleotide substrate specificity, this model describes the ATP-dependent groups.
Statistics
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PSSM-Id: 238270
Aligned: 28 rows
Threshold Bit Score: 806.832
Created: 6-Mar-2002
Updated: 2-Oct-2020
Structure
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Program:
Drawing:
Aligned Rows:
 
Conserved site includes 22 residues -Click on image for an interactive view with Cn3D
Feature 1:active site [active site]
Evidence:

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1                                                   #                                   
1K3C_A       21 HDIVYNPSYDLLYQEELDpsltgyERGVLTNLGAVAVDTGIFTGRSPKDKYIVRDDTTRDTFWWAdkgkgknDNKPLSPE 100 Escherichia coli
1J3B_A       13 KRVFWNTVSPVLVEHTLLr-----GEGLLAHHGPLVVDTTPYTGRSPKDKFVVREPEVEGEIWWGe------VNQPFAPE 81  Thermus thermoph...
P43085       22 SVVRYNFEAAQLYEEALAr-----GEAELTAHGALCARTGQHTGRSPKDKYVVRDANTADQIWWD-------NNSAISPE 89  Sinorhizobium me...
Q9HTZ7        6 NAVYTDISAAQLVEEAIRr-----GEGELAANGSLVVRTGHRTGRSPVDRFIVEEPSTKDAIAWGn------INRPFPAD 74  Pseudomonas aeru...
Q8R943       13 KNVYRNLPVAKLIEEAVKr-----EEGVLVNNGAFNVYTGKYTGRSPNDKFIVDEPEVHEDIWWE-------NNKPISVE 80  Thermoanaerobact...
Q8REI2       15 TAAHYNLSPAQLVEKALAn-----NEGILSDTGAFVISTGKYTGRAPDDKFFVDTPEVHKYIDWS-------RNQPIEKE 82  Fusobacterium nu...
ZP_00080887  26 NLIYWTPPTAVLYEQIVKr-----GEGLVTHLGAVAVKTGHYTGRAANEKFIVDEPSSNDHIAWGk------VNQPFDSA 94  Geobacter metall...
Q8NVZ8       19 PTSHFQLSTTQLYNKILDn-----NEGVLTELGAVNASTGKYTGRSPKDKFFVSEPSYRDNIDWGe------INQPIDEE 87  Staphylococcus a...
NP_821062     7 RVTYINLSPDELIQHAVKn-----GEGVLSSTGALAVTTGKRTGRSPKDRFIVKDEQTADQVAWGn------INQPVEQR 75  Coxiella burneti...
Q9K7Q7       17 QHVLKNAPASTLVEKSLLr-----GEGRLTDTGALTVATGAYTGRSPKDKFIVDETSVHEKIEWGq------VNQAIEKE 85  Bacillus halodurans
Feature 1                                                                                       
1K3C_A      101 TWQHLKGLVTRQLSG-KRLFVVDAFCGANPDTRLSVRFITEVAWQAHFVKNMFIRPs----dEELAGFkpDFIVMNGAKC 175 Escherichia coli
1J3B_A       82 AFEALYQRVVQYLSE-RDLYVQDLYAGADRRYRLAVRVVTESPWHALFARNMFILPrrfgndDEVEAFvpGFTVVHAPYF 160 Thermus thermoph...
P43085       90 HFEVLRRDMLAHAKG-MSLYVQDLVGGADPENALPTRVVTEFAWHSLFIRNLLIRPe----rEALPSFqpKLTIIDLPSF 164 Sinorhizobium me...
Q9HTZ7       75 KFDALWARVEAFNNA-QDHFVSHVHVGSAEAYYLPVKMTTATAWQNLFGRCLFIEPe----qYNPAGKd-EWQVLNVANF 148 Pseudomonas aeru...
Q8R943       81 KFEKLYNRLIAYLQN-RDLFIFDGFVGADPQYRVSIRVITEYAYQSLMARQLFIRPt----eKELQNFvpEYTLIAAPRF 155 Thermoanaerobact...
Q8REI2       83 KFDAIFGKLVAYLQN-REIFIFDGRAGANPEYTRRFRVINELASQNLFIHQLLIRTd----eEYNENNdiDFTIISAPNF 157 Fusobacterium nu...
ZP_00080887  95 KFDALFGRMLAYLHG-KDIFVQECFAGCSPDHRLPVRVITERAWHSLFARNMFVRAt----pEELVGFkpGFTVIDLPAF 169 Geobacter metall...
Q8NVZ8       88 TFLKLYHKVLDYLDKkDELYVFKGYAGSDKDTMLKLTVINELAWHNLFAKNMFIRPes---kEEATKIkpNFTIVSAPHF 164 Staphylococcus a...
NP_821062    76 TFDQLWERALRYLSE-RAVYISHLQVGADDNYFLPLKVVTEFAWHNLFACDLFIRPs----gDHANGKp-SWVILSAPGL 149 Coxiella burneti...
Q9K7Q7       86 TFLHLYEKVLTYLADkDELFEFRGFAGADKTYRLPLQVVNEFAWHNLFAQQLFIQPt----tEELTQHtpEFTIVSAPGF 161 Bacillus halodurans
Feature 1                                      # #  ##                   #                  ####
1K3C_A      176 TNPqwkEQGLNSENFVAFNLTERMQLIGGTWYGGEMKKGMFSMMNYLLP-LKGIASMHCSANVGEKG-DVAVFFGLSGTG 253 Escherichia coli
1J3B_A      161 QAVp-eRDGTRSEVFVGISFQRRLVLIVGTKYAGEIKKSIFTVMNYLMP-KRGVFPMHASANVGKEG-DVAVFFGLSGTG 237 Thermus thermoph...
P43085      165 KADp-vRHGCRSETVIACDLTNGLVLIGGTSYAGEMKKSVFTVLNYLLP-EKSVMPMHCSANVGPAG-DTAIFFGLSGTG 241 Sinorhizobium me...
Q9HTZ7      149 ECVp-eRDGTNSDGCVILNFAQKKVLIAGMRYAGEMKKAMFSVQNFLLP-ERDVLPMHCAANIGEAG-DVTLFFGLSGTG 225 Pseudomonas aeru...
Q8R943      156 KAIp-eIDGVNSEAFIILSFTKKLIIIGGTQYGGEIKKSIFTLMNYLMP-KKGVLSMHCSANIGKDG-DTALFFGLSGTG 232 Thermoanaerobact...
Q8REI2      158 HCVp-eIDGVNSEAAIIINFEKKIAIICATKYSGEIKKSVFSIMNYIMP-HENILPMHCSANMDPVThETAIFFGLSGTG 235 Fusobacterium nu...
ZP_00080887 170 HAIp-sVDGTNTETFIIVNFEKRLIIIGGTSYAGEIKKSIFTILNYLLPqHKNVLSMHCSANVGEKD-DVAVFFGLSGTG 247 Geobacter metall...
Q8NVZ8      165 KADp-eVDGTKSETFVIISFKHKVILIGGTEYAGEMKKGIFSVMNYLLP-MQDIMSMHCSANVGEKG-DVALFFGLSGTG 241 Staphylococcus a...
NP_821062   150 KTDp-eRDGVNSDGAVMINLSQRRVLLVGMPYAGEMKKAMFSVLNYLLP-PHDVLPMHCAANAGQSG-DVALFFGLSGTG 226 Coxiella burneti...
Q9K7Q7      162 KADp-sVDGTRSEAFVIISFEERIVLIGGTEYAGEMKKSIFSVMNYLLP-EQDVLSMHCSANVGVEG-DVALFFGLSGTG 238 Bacillus halodurans
Feature 1       ###           ##                # #        #                                    
1K3C_A      254 KTTLSTDPKRRLIGDDEHGWDDDGVFNFEGGCYAKTIKLSKEAEPEIYNAIR-RDALLENVTVR-EDGTIDFDDGSKTEN 331 Escherichia coli
1J3B_A      238 KTTLSTDPERPLIGDDEHGWSEDGVFNFEGGCYAKVIRLSPEHEPLIYKASNqFEAILENVVVNpESRRVQWDDDSKTEN 317 Thermus thermoph...
P43085      242 KTTLSADPNRTLIGDDEHGWSEKGVFNFEGGCYAKAIRLSEAAEPEIFATTRrFGTVMENVVLD-ERRLPDFDDGSLTEN 320 Sinorhizobium me...
Q9HTZ7      226 KTTLSADESRYLIGDDEHGWGEGVVFNVEGGCYAKCIDLSEKNEPVIWKAIK-FGAVLENVVLD-EERVPNYADDSLTQN 303 Pseudomonas aeru...
Q8R943      233 KTTLSADPERFLIGDDEHGWSERGIFNFEGGCYAKCINLSREKEPQIWDSIR-FGAILENVVYDeATRELDYTSDKITEN 311 Thermoanaerobact...
Q8REI2      236 KTTLSADPNRKLIGDDEHGWCDKGIFNFEGGCYAKCINLKEESEPEIYRAIK-FGSLVENVVVDpITRKIQYEDASITPN 314 Fusobacterium nu...
ZP_00080887 248 KTTLSADPRRRLIGDDEHGWDNSGVFNFEGGCYAKIINLSPEAEPEIYQTTRrFGTILENVAIDtVSRRIDLNDDSFTEN 327 Geobacter metall...
Q8NVZ8      242 KTTLSADPHRKLIGDDEHGWNKNGVFNIEGGCYAKAINLSKEKEPQIFDAIK-YGAILENTVVA-EDGSVDFEDNRYTEN 319 Staphylococcus a...
NP_821062   227 KTTLSADPHRFLIGDDEHGWSATSVFNFEGGCYAKCIDLSQEREPMIWNAIR-HGAIMENVVLD-ENGVPDYADARLTQN 304 Coxiella burneti...
Q9K7Q7      239 KTTLSADPNRKLIGDDEHGWSERGVFNIEGGCYAKCVNLSYEKEPQIWNAIR-FGSVLENVIVDeKTGLPDYNDTSLTEN 317 Bacillus halodurans
Feature 1        #                                                                              
1K3C_A      332 TRVSYPIYHIDNIVKpvskAGHATKVIFLTADAFGVLPPVSRLTADQTQYHFLSGFTAKLAGTERG-ITEPTPTFSACFG 410 Escherichia coli
1J3B_A      318 TRSSYPIAHLENVVEsg-vAGHPRAIFFLSADAYGVLPPIARLSPEEAMYYFLSGYTARVAGTERG-VTEPRATFSACFG 395 Thermus thermoph...
P43085      321 TRCAYPLHFIPNASKtg-tAPQPRTIIMLTADAFGVLPPIAKLTPEQAMYHFLSGYTAKVAGTEKG-VTEPEATFSTCFG 398 Sinorhizobium me...
Q9HTZ7      304 SRAAYPLEHVEKRSEkn-lGGEPNAVIFLTCDLTGVLPPVSILNNEQAAYHFLSGYTALVGSTEMGsGGGIKSTFSTCFG 382 Pseudomonas aeru...
Q8R943      312 TRAAYPIDFIPGAVQsg-iGGHPKTIIFLTADAFGVLPPIAKLTKEQAMYYFLSGYTSKLAGTERG-ITEPQATFSTCFG 389 Thermoanaerobact...
Q8REI2      315 TRVGYPIDYIPNAELsg-vGGIPKVVIFLTADSFGVLPPISRLSQEAAMYHFVTGFTAKLAGTELG-VKEPVPTFSTCFG 392 Fusobacterium nu...
ZP_00080887 328 TRASYPITHIPNIVKsg-mGGHPTNIIMLTCDAFGVLPPIARLTPDQAMYHFLSGYTAKVAGTEAG-ITEPQAAFSACFG 405 Geobacter metall...
Q8NVZ8      320 TRAAYPINHIDNIVVps-kAAHPNTIIFLTADAFGVIPPISKLNKDQAMYHFLSGFTSKLAGTERG-VTEPEPSFSTCFG 397 Staphylococcus a...
NP_821062   305 SRAAYPREYIPLRVEnn-rGRPPDAVLFLTCDLDGVLPPVALLTKEQAAYYFLSGYTALVGSTEVGsVKGVTSTFSTCFG 383 Coxiella burneti...
Q9K7Q7      318 TRAAYSLEAIPNSVIps-vAGHPNTIIFLTADAFGVLPPISKLTPEQAMYHFLSGYTSKLAGTERG-VTSPEATFSTCFG 395 Bacillus halodurans
Feature 1                                                  #  #  #                              
1K3C_A      411 AAFLSLHPTQYAEVLVKRMQAAGAQAYLVNTGWNG-----TGKRISIKDTRAIIDAILNGSLDNAETFTLPMFNLAIPTE 485 Escherichia coli
1J3B_A      396 APFLPMHPGVYARMLGEKIRKHAPRVYLVNTGWTGgp-ygVGYRFPLPVTRALLKAALSGALENVPYRRDPVFGFEVPLE 474 Thermus thermoph...
P43085      399 APFMPRHPSEYGNLLKDLIARNGVTCWLVNTGWTGga-fgTGSRMPIKVTRALLSAALDGSLNNASFRTDANFGFAVPVS 477 Sinorhizobium me...
Q9HTZ7      383 APFFPRPAGVYAELLIKRIKAFGSKVYLVNTGWTGgg-ygVGKRFNIPTTRGVIAAIQSGALIGAETEHLEIINLDVPKA 461 Pseudomonas aeru...
Q8R943      390 APFLPLPPMVYAKMLGEKIEKYDTKVFLVNTGWSGgp-ygIGKRINLEYTRKMVSAALKGELDKVEFTKDPIFNLNIPAS 468 Thermoanaerobact...
Q8REI2      393 EPFMPMDPSVYAEMLGERLKKHNTKVYLINTGWSGga-ygTGKRINLKYTRAMVTAVLNGYFDNAEYKHDDIFNLDIPQS 471 Fusobacterium nu...
ZP_00080887 406 APFMALHPSVYAKLLGEKIARHGVSCWLVNTGWSGgp-ygVGSRMKIAYSRALVNAAIDGTLNAGSFVKDQFFGLDIPTG 484 Geobacter metall...
Q8NVZ8      398 APFFPLHPTVYADLLGELIDLHDVDVYLVNTGWTGgk-ygVGRRISLHYTRQMVNQAISGKLKNAEYTKDSTFGLSIPVK 476 Staphylococcus a...
NP_821062   384 APFFPRPPTVYAELLMKRIEATGCQVYLVNTGWTGgaygeGGERFSIPTTRAIVNAVLSGKLKEGPTEVLSGFNLTIPKS 463 Coxiella burneti...
Q9K7Q7      396 APFLPLPAARYAEMLGEKIAQYEVQVFLVNTGWSGgp-ygVGQRMKLSYTRAMVQAALQGELNTVETITDSVFGLHIPTR 474 Bacillus halodurans
Feature 1                                                           
1K3C_A      486 LPGVDTKILDPRNTYASPEQWQEKAETLAKLFIDNFDKYtdtpAGAALVAAG 537 Escherichia coli
1J3B_A      475 APGVPQELLNPRETWADKEAYDQQARKLARLFQENFQKYas-gVAKEVAEAG 525 Thermus thermophilus
P43085      478 VPGVEAGILDPRSTWADGVAYDTQARRLVDMFIANFAKFer-hVDGSVRDAA 528 Sinorhizobium meliloti
Q9HTZ7      462 VPGVETNLLNPRNTWADKAAYDEAAKGLAKQFIENFKKFe---VSDAIKAAG 510 Pseudomonas aeruginosa
Q8R943      469 CPGVPSEILNPRNTWKDKEEYDKTAKRLAQRFIENFQKYk--eVSEEIKNAG 518 Thermoanaerobacter tengcongensis
Q8REI2      472 CPGVPSEIMNPIDTWQDRDKYIIAAKKLANLFYNNFKEKyp-nMPENITNAG 522 Fusobacterium nucleatum subsp. nucleatum
ZP_00080887 485 CSGVPAEVLNPKNTWVDKTKYDETATMLVERFRKNFEQYrs-yVSAGVAEVM 535 Geobacter metallireducens
Q8NVZ8      477 IEDVPKTILNPINAWSDKEKYKAQAEDLIQRFEKNFEKFg--eKVEHIAEKG 526 Staphylococcus aureus subsp. aureus MW2
NP_821062   464 ALGVDDHLLNPRKTWEDVSAYDARAQRLIQKFRENFEKFk---VLAAIREAG 512 Coxiella burnetii RSA 493
Q9K7Q7      475 CPGVPDFVLQPRNTWDDKEKYDKKAQELAKQFIENFKRFt--nVSEAIQKAG 524 Bacillus halodurans

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