2BTV


Conserved Protein Domain Family
Orbi_VP3

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pfam01700: Orbi_VP3 (this model, PSSM-Id:279964 is obsolete and has been replaced by 460298)
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Orbivirus VP3 (T2) protein
The orbivirus VP3 protein is part of the virus core and makes a 'subcore' shell made up of 120 copies of the 100K protein. VP3 particles can also bind RNA and are fundamental in the early stages of viral core formation. Also found in the family is structural core protein VP2 from broadhaven virus which is similar to VP3 in bluetongue virus. Orbivirus are part of the larger reoviridae which have a dsRNA genome of 10-12 linear segments; orbivirus found in this family include bluetongue virus and epizootic hemorrhagic disease virus.
Statistics
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PSSM-Id: 279964
Aligned: 3 rows
Threshold Bit Score: 1817.39
Created: 19-Apr-2021
Updated: 29-Sep-2021
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
2BTV_A  14 TTPYLEGDVLSSDSGPLLSVFALQEIMQKVRQVQADYMTATREVDFTVPDVQQILDDIKALAAEQVYKIVKVPSTSFRHI 93  Bluetongue virus (ser...
P12435  14 TTPYLEGDVLSSDSGPLLSVFALQEIMQKVRQVQADYMTATREVDFTVPDVQKILDDIKTLAAEQVYKIVKVPSISFRHI 93  Bluetongue virus (ser...
P12435  14 TTPYLEGDVLSSDSGPLLSVFALQEIMQKVRQVQADYMTATREVDFTVPDVQKILDDIKTLAAEQVYKIVKVPSISFRHI 93  Bluetongue virus (ser...
2BTV_A  94 VTQSRDRVLRVDTYYEEMSQVGDVITEDEPEKFYSTIIKKVRFIRGKGSFILHDIPARDHRGMEVAEPEVLGVEFKNVLP 173 Bluetongue virus (ser...
P12435  94 VMQSRDRVLRVDTYYEEMSQVGDVITEDEPEKFYSTIIKKVRFIRGKGSFILHDIPTRDHRGMEVAEPEVLGVEFKNVLP 173 Bluetongue virus (ser...
P12435  94 VMQSRDRVLRVDTYYEEMSQVGDVITEDEPEKFYSTIIKKVRFIRGKGSFILHDIPTRDHRGMEVAEPEVLGVEFKNVLP 173 Bluetongue virus (ser...
2BTV_A 174 VLTAEHRAMIQNALDGSIIENGNVATRDVDVFIGACSEPIYRIYNRLQGYIEAVQLQELRNSIGWLERLGQRKRITYSQE 253 Bluetongue virus (ser...
P12435 174 VLTAEHRAMIQNALDGSIIENGNVATRDVDVFIGACSEPIYRIYNRLQGYIEAVQLQELRNSIGWLERLGQRKRITYSQE 253 Bluetongue virus (ser...
P12435 174 VLTAEHRAMIQNALDGSIIENGNVATRDVDVFIGACSEPIYRIYNRLQGYIEAVQLQELRNSIGWLERLGQRKRITYSQE 253 Bluetongue virus (ser...
2BTV_A 254 VLTDFRRQDMIWVLALQLPVNPQVVWDVPRSSIANLIMNIATCLPTGEYIAPNPRISSITLTQRITTTGPFAILTGSTPT 333 Bluetongue virus (ser...
P12435 254 VLTDFRRQDTIWVLALQLPVNPQVVWDVPRSSIANLIMNIATCLPTGEYIAPNPRISSITLTQRITTTGPFAILTGSTPT 333 Bluetongue virus (ser...
P12435 254 VLTDFRRQDTIWVLALQLPVNPQVVWDVPRSSIANLIMNIATCLPTGEYIAPNPRISSITLTQRITTTGPFAILTGSTPT 333 Bluetongue virus (ser...
2BTV_A 334 AQQLNDVRKIYLALMFPGQIILDLKIDPGERMDPAVRMVAGVVGHLLFTAGGRFTNLTQNMARQLDIALNDYLLYMYNTR 413 Bluetongue virus (ser...
P12435 334 AQQLNDVRKIYLALMFPGQIVLDLKIDPGERMDPAVRMVAGVVGHLLFTAGGRFTNLTQNMARQLDIALNDYLLYMYNTR 413 Bluetongue virus (ser...
P12435 334 AQQLNDVRKIYLALMFPGQIVLDLKIDPGERMDPAVRMVAGVVGHLLFTAGGRFTNLTQNMARQLDIALNDYLLYMYNTR 413 Bluetongue virus (ser...
2BTV_A 414 VQVNYGPTGEPLDFQIGRNQYDCNVFRADFATGTGYNGWATIDVEYRDPAPYVHAQRYIRYCGIDSRELINPTTYGIGMT 493 Bluetongue virus (ser...
P12435 414 VQVNYGPTGEPLDFQIGRNQYDCNVFRADFATGTGYNGWATIDVEYRDPAPYVHAQRYIRYCGIDSRELINPTTYGIGMT 493 Bluetongue virus (ser...
P12435 414 VQVNYGPTGEPLDFQIGRNQYDCNVFRADFATGTGYNGWATIDVEYRDPAPYVHAQRYIRYCGIDSRELINPTTYGIGMT 493 Bluetongue virus (ser...
2BTV_A 494 YHCYNEMLRMLVAAGKDSEAAYFRSMLPFHMVRFARINQIINEDLHSVFSLPDDMFNALLPDLIAGAHQNADPVVLDVSW 573 Bluetongue virus (ser...
P12435 494 YHCYNEMLRMLVAAGRDSEAAYFRSMLPFHMVRFARINQIINEDLHSVFSLPDDMFNALLPDLIAGAHQNADPVVLDVSW 573 Bluetongue virus (ser...
P12435 494 YHCYNEMLRMLVAAGRDSEAAYFRSMLPFHMVRFARINQIINEDLHSVFSLPDDMFNALLPDLIAGAHQNADPVVLDVSW 573 Bluetongue virus (ser...
2BTV_A 574 ISLWFAFNRSFEPTHRNEMLEIAPLIESVYASELSVMKVDMRHLSLMQRRFPDVLIQARPSHFWKAVLNDSPEAVKAVMN 653 Bluetongue virus (ser...
P12435 574 ISLWFAFNRSFEPTHRNEMLEIAPLIESVYASELSVMKVDMRHLSLMQRRFPDVLIQARPSHFWKAVLNDSPEAVKAVMN 653 Bluetongue virus (ser...
P12435 574 ISLWFAFNRSFEPTHRNEMLEIAPLIESVYASELSVMKVDMRHLSLMQRRFPDVLIQARPSHFWKAVLNDSPEAVKAVMN 653 Bluetongue virus (ser...
2BTV_A 654 LSHSHNFINIRDMMRWVLLPSLQPSLKLVLEEEAWAAANDFEDLMLTDQVYMHRDMLPEPRLDDIERFRQEGFYYTNMLE 733 Bluetongue virus (ser...
P12435 654 LSHSHNFINIRDMMRWVLLPSLQPSLKLVLEEEAWAAANDFEDLMLTDQVYMHRDMLPEPRLDDIERFRQEGFYYTNMLE 733 Bluetongue virus (ser...
P12435 654 LSHSHNFINIRDMMRWVLLPSLQPSLKLVLEEEAWAAANDFEDLMLTDQVYMHRDMLPEPRLDDIERFRQEGFYYTNMLE 733 Bluetongue virus (ser...
2BTV_A 734 APPEIDRVVQYTYEIARLQANMGQFRAALRRIMDDDDWVRFGGVLRTVRVKFFDARPPDDILQGLPFSYDTNEKGGLSYA 813 Bluetongue virus (ser...
P12435 734 APPEIDRVVQYTYEIARLQANMGQFRAALRRIMDDDDWVRFGGVLRTVRVKFFDARPPDDILQGLPFSYDTNEKGGLSYA 813 Bluetongue virus (ser...
P12435 734 APPEIDRVVQYTYEIARLQANMGQFRAALRRIMDDDDWVRFGGVLRTVRVKFFDARPPDDILQGLPFSYDTNEKGGLSYA 813 Bluetongue virus (ser...
2BTV_A 814 TIKYATETTIFYLIYNVEFSNTPDSLVLINPTYTMTKVFINKRIVERVRVGQILAVLNRRFVAYKGKMRIMDITQSLKMG 893 Bluetongue virus (ser...
P12435 814 TIKYATETTIFYLIYNVEFSNTPDSLVLINPTYTMTKVFINKRIVERVRVGQILAVLNRRFVAYKGKMRIMDITQSLKMG 893 Bluetongue virus (ser...
P12435 814 TIKYATETTIFYLIYNVEFSNTPDSLVLINPTYTMTKVFINKRIVERVRVGQILAVLNRRFVAYKGKMRIMDITQSLKMG 893 Bluetongue virus (ser...
2BTV_A 894 TKLAAPTV 901 Bluetongue virus (serotype 1 / isolate South Africa)
P12435 894 TKLAAPTV 901 Bluetongue virus (serotype 10 / American isolate)
P12435 894 TKLAAPTV 901 Bluetongue virus (serotype 10 / American isolate)
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