3AY5


Conserved Protein Domain Family
GCIP

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pfam13324: GCIP (this model, PSSM-Id:404240 is obsolete and has been replaced by 463844)
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Grap2 and cyclin-D-interacting
GCIP, or Grap2 and cyclin-D-interacting protein, is found in eukaryotes, and in the human protein CCNDBP1, residues 149-190 constitute a helix-loop-helix domain, residues 190-240 an acidic region, and 240-261 a leucine zipper domain. GCIP interacts with full-length Grap2 protein and with the COOH-terminal unique and SH3 domains (designated QC domain) of Grap2. It is potentially involved in the regulation of cell differentiation and proliferation through Grap2 and cyclin D-mediated signalling pathways. In mice, it is involved in G1/S-phase progression of hepatocytes, which in older animals is associated with the development of liver tumors. In vitro it acts as an inhibitory HLH protein, for example, blocking transcription of the HNF-4 promoter. In its function as a cyclin D1-binding protein it is able to reduce CDK4-mediated phosphorylation of the retinoblastoma protein and to inhibit E2F-mediated transcriptional activity. GCIP has also been shown to have interact physically with Rad (Ras associated with diabetes), Rad being important in regulating cellular senescence.
Statistics
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PSSM-Id: 404240
Aligned: 40 rows
Threshold Bit Score: 160.541
Created: 21-May-2020
Updated: 7-Aug-2020
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
3AY5_A        55 RLNEAAVTVSREATTLTIVFSqlp------lpsPQETQKFCEQVHAAIKAF-IAVYYLLPKDQGITLRKLVRGATLDIVD 127 human
EMD38311      42 dflslltLVYTSTTKLTLTLrps-------epsYTAAVGPLRDLLQHVSSL--TTCATLFDAHGATLSTEVKTVARQVID 112 Gelatoporia sub...
EGN92438      46 dldsllSLIYASTTKISLVLkps-------sptYSASLTPIQDLSKHISRLvHCNNLLSPDIHGLTLSKEVAYLTTTIIE 118 Serpula lacryma...
EMF11574      46 vlrDSAKLLKAHTTKLSLLAIntpft---pseiTKILRELAGTCLPAMMSA-VQICEQEKSTWGSSMGREVTNRVRRVFR 121 Sphaerulina mus...
XP_002555686  48 ELDKLSRIIKAHATKVGIIYHpgkfhk-nvtpaFKELQLFSNSIFFLLSLLpLLHT----DKIADYFTDELDSAVLGLLS 122 Lachancea therm...
Q6FJ24        49 eLEKLAKILKAYSTKLGIICEpsklhg-nyhaaYTELKNYADSLFYLLSLLpLF-TREQGKLYASYLNEDVFTQVLGLLN 126 [Candida] glabrata
CCK70973      51 ELGKLSQLIRSHATKIGIVLNpetfnpqnyaavYKELKSLIDVVFLLFSVTpLFYTAQNKKMYAQFLLERLDSALLNLLN 130 Kazachstania na...
XP_003682967  47 EIQKLSQIIKAHSTKIGIVCQpakffe-nypvvFKELQNFTNSLFYLLSILpLIHN-DKSDTWTSYLAKKLDSLVLNLLN 124 Torulaspora del...
Q54EF9        36 QIIKSAKTLSHEITKISLLLAd-----------LRAKTEYFSSIEETLDNI-FSIYQGLSAYSGASLFRIIQIYFRKLIK 103 Dictyostelium d...
EFA79374      43 NIVKSAKTLSHEITKISLLLQd-----------CRAKPEFFSNIEECLDNL-FSIYQGLCGYSGASLFRQIQIYFKRVYK 110 Heterostelium a...
3AY5_A       128 GMAQLMEVLSVT-------------PTQSPENNDLIS--YNSVWVACQQM---PQIPR-DNKAAALLMLTKNVDFVKDAH 188 human
EMD38311     113 SLHSLSENFVN-----------------QGGEGYLVA--TGTVHDVVSQAq--QSLST-DNVSAVKKRWAADRGMLDDVL 170 Gelatoporia sub...
EGN92438     119 SIRALVQTFLNLaahp-----ssiaSSSQAGEEYLVR--TGTVHDLIEKArgpKGIPK-DNLTAVRKKWKEDKGPLEDGF 190 Serpula lacryma...
EMF11574     122 EVENLLKELKSIagg--------ngQGATKARDSLAS--TGVVWESCDAL---IELERlGVAGLAVKKAEEYRDTIKDAI 188 Sphaerulina mus...
XP_002555686 123 GVKGLCDEIDSLldgkaapapgndvPETAEHDLRLVS--VGKIWASCDSL---QELAKlGNLGLLNKRIGASVKLITDSL 197 Lachancea therm...
Q6FJ24       127 GTEMLCDEICSSs-----------kENEGDNKDRLIS--VGIIWASCDEL---CDIVKgGNYGLLSKRIALSCGLVDDVL 190 [Candida] glabrata
CCK70973     131 GLNFLSEELKGKl------------EDGSFDENRLRS--VGILWSTCDAL---DDISTkGNFGLLSDKVKVSSDMINDVV 193 Kazachstania na...
XP_003682967 125 GVSSLCQDIERMi-----------eEGKGDDNDRLIT--IGSIWAACDSL---DELAKkGNFQLLADSIRSSCDLVDDMV 188 Torulaspora del...
Q54EF9       104 STQDVFIAYQNNe-----------qSLGDDEENTISKqiTGLAWKCCEEL---EKVPI-KNSNSIISRGEEISSLIQDAL 168 Dictyostelium d...
EFA79374     111 SLYDTLYTFMENe-----------kRIGEDEENTVPKerIGIAWKSCELL---EKIPL-RNSSAICVRMEELLTMINDAY 175 Heterostelium a...
3AY5_A       189 EEMEQAVEEs--------------------------------------------------------DPYSGLLNDTEENn 212 human
EMD38311     171 SEVADMLENgapd--------------------------------------------------eeeDEDEDDFDDEWDE- 199 Gelatoporia sub...
EGN92438     191 REVGEMIEDanqg--------------------------------------------------gseSSGED--DDGWDEl 218 Serpula lacryma...
EMF11574     189 AELQEWKDDvdd---------------------------------------------------allDSGDDGVDGDADSl 217 Sphaerulina mus...
XP_002555686 198 SELDEWLQDpe-----------------------------------------------------leSQDPFGLESEPESd 224 Lachancea therm...
Q6FJ24       191 EDIHGWLEDpq------------------------------------------------------lEGADDFLGDDLDSi 216 [Candida] glabrata
CCK70973     194 TEIDEFLEDpes---------------------------------------------------vleGMADLGLSDLETE- 221 Kazachstania na...
XP_003682967 189 QDVDSWLEDpqf---------------------------------------------------gdeLLIDDDLSDEDDE- 216 Torulaspora del...
Q54EF9       169 EEVKEFQSKlknlekqfgqvssekhqvskdgtvivdgesttdkdsndkksddvngefekededqdqDEDEDYDDEDDIEl 248 Dictyostelium d...
EFA79374     176 DEVDEVNDGienykkrmsepanpddeeaeeks-----------tekggkedkktnkqvekddedeeDEDEDDEDEDELEf 244 Heterostelium a...
3AY5_A       213 sdnhnh---------eddvlgFPSNQDLYWSEDDQELIIPCLALV-------RASKACLKKI---------------RML 261 human
EMD38311     200 ---------------------LGLGAKKKMSDTELARTKKVQPLL-------RFTTMLHKRVllda-------------- 237 Gelatoporia sub...
EGN92438     219 --------------------gLGSSSGRKMDKDELERTKNVHKIL-------RLTTLLHKRIlmd--------------- 256 Serpula lacryma...
EMF11574     218 dd-----------------ifHAANSCPKDRPELKELLDVATGKL-------KKIVFLYTAIgkrrfktfgskpledSRS 273 Sphaerulina mus...
XP_002555686 225 a-------------------eRD-------TSGDKEVLAEMVKFLeawqqklKMIRLLLSSF---------------SKS 263 Lachancea therm...
Q6FJ24       217 d------------------elEDGVKKMGIDGDDEEMIEIVKKFLsewqtkiKMIKLLLSSF---------------SKS 263 [Candida] glabrata
CCK70973     222 -----------------------------DAGDSTETIKAIRPFMevwknklKLIKLLLSSF---------------NST 257 Kazachstania na...
XP_003682967 217 ----------------------------EKEDDDAQALKAMEKFLiqwktnlKMVKLLLSSF---------------AKS 253 Torulaspora del...
Q54EF9       249 l--------------------------nnLTKQDIELVDKIVSVIerstkisQLWVEMLKSInkp--------------- 287 Dictyostelium d...
EFA79374     245 vddgeddeeedddffiedqafTGSSSMRMLNDEEMNAIATIWELA-------EKCVEYVDEFety----------vkDRE 307 Heterostelium a...
3AY5_A       262 VAE------NGKKD---QVAQ-LDDIVDISDEISPSVDDLALSIY-PPMSHLT----VRINSAKLVSVLKKALE 320 human
EMD38311     238 -----fpwfSSQSPaisNLT--LDPLPALSHDLLVNSEELAASLY-APQDLSN----VTSSVTSLADAVAKLQS 299 Gelatoporia subvermis...
EGN92438     257 -------llSSSSSvpsNVA--LDALLVQSGALLAASDDLVSTLY-VPQNSQT----VHEELQSFLDVVKALqt 316 Serpula lacrymans var...
EMF11574     274 VQD-------------------LDHILQGLHALQEDVDDIAAGFY--DLDEDA----VKQV---LNKCVADARE 319 Sphaerulina musiva SO...
XP_002555686 264 IA-------SEEYKskePLALqLAKLNTLHAVVVEKVDELISTVFmTGQDFDPedeeITELVSLLNDSlrkmvq 330 Lachancea thermotoler...
Q6FJ24       264 IT-------LTTGKnipNLGSkLDELNKLHKQVILHLDELVSDVFmSGAAFDEd--eMGPSIADLNDTLAKmvh 328 [Candida] glabrata
CCK70973     258 IT-------STTYNekdYSGSmLDELNSLHQSIAEQVDDFISDIYmADESFTAe--dSKEEISKLDATIRKMik 322 Kazachstania naganish...
XP_003682967 254 LA-------TNVYNsksTKASmLDKLHTLQLLIVEQLDEFLSDVFmSDASFEPa--dFKDNITALNDSLGQMVK 318 Torulaspora delbrueckii
Q54EF9       288 -------sdEDTDFtseQIQI-SESVIHQINELSKNVDDIASAIY-PLPNITY----CEAQLSLLDISIKDIId 348 Dictyostelium discoid...
EFA79374     308 PTKpedlddLSSDLkpeQLAV-YEDLVLQFDELSKTVDDVVSGIY-PPQNAYF----ISGQIEYLQSKLNKMAK 375 Heterostelium album P...
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