Conserved Protein Domain Family
Mitovir_RNA_pol

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pfam05919: Mitovir_RNA_pol 
Mitovirus RNA-dependent RNA polymerase
This family consists of several Mitovirus RNA-dependent RNA polymerase proteins. The family also contains fragment matches in the mitochondria of Arabidopsis thaliana.
Statistics
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PSSM-Id: 253459
Aligned: 14 rows
Threshold Bit Score: 440.67
Created: 22-Mar-2022
Updated: 17-Oct-2022
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Q9ZXZ7 214 FNKLDKKSLAPTkfimsrSASPs------NKVSWFGILTDTRLLREGSPRLWENIQayltm-----------vgadqFRF 276 Thanatephorus cucumeris
Q6GYC2 156 SEFDDSNHFVSV------KSSP-------TGPSTLTALWGLWNHSYESFNWLFKIT---------------------SLS 201 Gremmeniella abietina...
Q9WJ22 155 PIYTDNDHYLSI------KGSP-------NGKASMSSLYSIISFNSSNIRYLFNIVgd------------------yQLV 203 Ophiostoma mitovirus 4
Q3S3F3 120 PTYDLSKHYLSP------KGGP-------MGKSTWSSIWSMYALKHELHLSLSYFLgea----------------ykTLF 170 Thielaviopsis basicol...
Q9WJ23 164 LQWSRDDHYLSF------KSSP-------NGQSTLHSSYGLFSMIFVGHTILENILkivg-------------ekqyHEI 217 Ophiostoma mitovirus 5
Q9WJ24 163 VQWDVKNFKLLT------KAGP-------HGPQSLTWYHTIKLYDFNQWLGIIGIL---------------------PKS 208 Ophiostoma mitovirus 6
Q6EH16   1 MKLRLKGSL---------KAGPn------GKISLLTSLLDALAFWSDPLRVIHFIWfnircygyfwgliwsmwlifiMII 65  Cryphonectria cubensi...
Q33339 246 LKLKITGSM---------KAGPn------GKISLLTSSVDALSFITQPTKIFTYLDfsvrvykfrg-lllwmwmmciLLI 309 Cryphonectria parasit...
Q18L80 166 LDFKISSTMAPWli---qSSGPcskkgcnNTEGWLTAIRRLKHLFTWGE-ITSILD------------------------ 217 Ophiostoma mitovirus 1a
Q18L79 168 VPFKISDLLNPFli---ySSGPcspkgmnNTAGWILAFRRLKALFLDKEFFLTLLD------------------------ 220 Ophiostoma mitovirus 1b
Q9ZXZ7 277 DLDYACSLADRLKSFddkvdsqgqwirqvsksgqVLTQVDSMKSKDSIrghgigpglgLSQFALKEEAAGKIRLFALMDS 356 Thanatephorus cucumeris
Q6GYC2 202 GVDYLTKIMNWTWLK-------------------DLGNKNNNKWSKQF----------LGSLSLIYDPECKVRIVAMLDY 252 Gremmeniella abietina...
Q9WJ22 204 LNKFYQDLSQFYTKY-------------------INRDKLG-----------------LGKLSIVHDPELKERVIAMVDY 247 Ophiostoma mitovirus 4
Q3S3F3 171 YLPYLKNMALSYGHD-------------------VPPKQWP-----------------SGKLGIVKDPEGKRRIIAMVDY 214 Thielaviopsis basicol...
Q9WJ23 218 IGNHIKKLYHDHRLF-------------------IPGKIDYL----------------FGKISIVKDPELKMRVIAMVDY 262 Ophiostoma mitovirus 5
Q9WJ24 209 VLDLFTETLSYASKL-------------------VLPEIKSNIKSTKL----------IRRLSIVHDPECKERVIAIFDY 259 Ophiostoma mitovirus 6
Q6EH16  66 SLPY------YLIAL-------------------CLGARAPV----------------MGQLATVYDQAGKARIVASTNS 104 Cryphonectria cubensi...
Q33339 310 TLPY------AIVSF-------------------MLGALIPI----------------MGKLSVVYDQAGKARIVAITNS 348 Cryphonectria parasit...
Q18L80 218 --PYKEGK--WEKSD-------------------FYSFWASIQP-LTDnv-------pIGKLAAKEEP-GKVRIFAMVDA 265 Ophiostoma mitovirus 1a
Q18L79 221 --PYKERRQWWESSP-------------------FIKYFNAILPDFDDnv-------sLGKLAFKEEP-GKVRVFAMADC 271 Ophiostoma mitovirus 1b
Q9ZXZ7 357 ITQSVMSPLHDYMFAILRNIPN-DGTFDQEASIARSQEKAVta-gkAFSYDLTAATDRLPVILTAFILSTIVGIrTFGGL 434 Thanatephorus cucumeris
Q6GYC2 253 TTQLFLRPIHNDLFKLLKKLPQ-DRTFTQNPLNDWENNEHS-----FWSIDLTAATDRFPISLQRRLLLYIYSDpEIANS 326 Gremmeniella abietina...
Q9WJ22 248 TTQFALRPIHNILLNNLSKLPC-DRTFTQDPFHKW-NDDHKe---rYHSLDLSAATDRFPIFLQQKLISLIFNDyEFGKN 322 Ophiostoma mitovirus 4
Q3S3F3 215 HSQLVLRSIHDGLLNKLRNLPQ-DRTYNQDPNNAWEENKEC-----FHSLDLSSATDRFPVKLQSRLLTEMYSDpSFGEN 288 Thielaviopsis basicol...
Q9WJ23 263 HSQFVLKKIHNSLFNKLKLIKS-DRTFTQDPIFTTPTMGHR-----FWSMDLSAATDRFPIDLQERLLSYLYGS-EISSA 335 Ophiostoma mitovirus 5
Q9WJ24 260 GSQMVLKPIADVLFDLLRNIPS-DRTFTQSPFFTHTDLDNKs---kFWSIDLSSATDRFPIVFQKRVLQKILGK-QMTDS 334 Ophiostoma mitovirus 6
Q6EH16 105 WIQCSLFGLHNKIFSILRSIPQ-DGTFDQNKPFDLLLESLQpg-ymLYGFDLSAATDRLPIAFQKDILNHLG---YPGGP 179 Cryphonectria cubensi...
Q33339 349 WIQTAFYSLHLHVFKLLKNIDQ-DGTFDQERPFKLLIKWLNeptqkFYGFDLTAATDRLPIDLQVDILNIIFKN-SPGSS 426 Cryphonectria parasit...
Q18L80 266 VTQWLLKPLHEAIFKLLNIFAF-DGTFDQIGQLEKFMDRMKdkapyYYSFDLSAATDRLPLSIQILILKHLVSV-PFSEA 343 Ophiostoma mitovirus 1a
Q18L79 272 ITQWVLHPLHQYLFSILKQISIvDATFDQEEGVKTLSAKIKagkrvVFSLDLSAATDRLPLTIQAQILNHIVP--KLGDH 349 Ophiostoma mitovirus 1b
Q9ZXZ7 435 WRSILVKRPFgfnsnvaekLKVSDGPYFYEVGQPMGALSSWPGLALTHHWIVQVAAFRVtnSKSWNTEYEILGDDIVIFN 514 Thanatephorus cucumeris
Q6GYC2 327 WQNLLVHREY---------ARNGLNPIKYSVGQPMGAYSSWPAFTLSHHLVVHWCAHLC--HINKFKDYIILGDDIVIHN 395 Gremmeniella abietina...
Q9WJ22 323 WRNLLVDRNY----------DYQGISYRYSVGQPMGAYTSWAAFTLTHHLVVHWAAELA--GLKNFKDYIILGDDIVIKN 390 Ophiostoma mitovirus 4
Q3S3F3 289 WMNLLLNRDYll-----peEGLSGERLRYAVGQPMGAYSSWAAFTLSHHLVVAWCTYKSk-KVIRSSQYIILGDDIVIKD 362 Thielaviopsis basicol...
Q9WJ23 336 WKQLLIDRTY---------KTPEGDELHYKVGQPMGAYSSWAAFTLTHHLVVFYSARMA--GIKDFTNYILLGDDIVINN 404 Ophiostoma mitovirus 5
Q9WJ24 335 WERIMIGSKF---------LAPDGDTVSYNCGQPMGAQSSWPMFTLAHHVIVRVAANRC--GLSNFDKYIILGDDIVINN 403 Ophiostoma mitovirus 6
Q6EH16 180 WRRLL-GIKY----------NSPCGFISYAVGQPMGAYSSFAMLALTHHVLVQVAAQKAg-FSDRFTDYCILGDDIVIAN 247 Cryphonectria cubensi...
Q33339 427 WRSLL-RIKY----------KSPQGFLTYAVGQPMGAYSSFAMLALTHHVIVQVAALNSg-FTTRFTDYCILGDDIVIAH 494 Cryphonectria parasit...
Q18L80 344 WGRLLTGRTYhl------fYKKTSYEVQYQVGQPMGALSSWGMLALTHHLVVQYSAYLAfgKVNLFKDYIVLGDDIVIGN 417 Ophiostoma mitovirus 1a
Q18L79 350 WANLLVNRDYsvpn--httLPVNPGTVRYGAGQPMGAYSSWAMLALTHHFIVQYCAFKVyhTNSFFKDYLILGDDLLLLD 427 Ophiostoma mitovirus 1b
Q9ZXZ7 515 ELIAQEYLNIMAV-IGCEINLNKSISSrcRPVFEFAKRTCW-GFAIVSGISLA----------QIRAGWR-IGGRVANAL 581 Thanatephorus cucumeris
Q6GYC2 396 DKVAKKYIEIMGK-LGVGLSDSKTHVS--KDTYEFAKRWIH-KGQEISPLPIT----------GIVNNITnPYIVLMNLY 461 Gremmeniella abietina...
Q9WJ22 391 NKVAQIYINLMTK-WGVDISLSKTHVS--YDTYEFAKRWIK-NGKEISGISLK----------GILTNIRhIHVVYMNIF 456 Ophiostoma mitovirus 4
Q3S3F3 363 NDIARKYIGQMSK-LGVAISMQKTHVS--KDTYEFAKRWVH-KGVEISGLPLK----------GIFYNIShMRRMYTIIF 428 Thielaviopsis basicol...
Q9WJ23 405 DKVAKYYIRTMKR-LGVELSMNKTHVS--KNTYEFAKRWFK-NKKEITGLPLR----------GILNNLNnYGIVFQELF 470 Ophiostoma mitovirus 5
Q9WJ24 404 DNVALKYMEIMND-FKVEISRNKTHVS--NDTYEFAKRWIK-NKMEFFPLPIR----------GIVDNINnKYIIFNILY 469 Ophiostoma mitovirus 6
Q6EH16 248 SLVAEAYKSLIFD-LGLEISESKSVIS--GTFTEFAKKLRG-PLMDISPIGAG----------LILYSLRnKYYICVLVF 313 Cryphonectria cubensi...
Q33339 495 DTVASEYLKLMET-LGLSISSGKSVIS--SEFTEFAKKLKGrNNFDIFYRSWF----------SIIHFEKqILHLCT-VF 560 Cryphonectria parasit...
Q18L80 418 HEVSIRYHYLMTEiLKVKINPTKGIMS--PHSLEFAKRFYV-QYQDCSPLSLKefssfgtvysSFTASLRkLDISVPNLL 494 Ophiostoma mitovirus 1a
Q18L79 428 AKVAKQYLQVMNQ-LDVGVNLAKSLISv-RGYGEFAKQFLS-PDGPLQGVSLRefsslkdgmsNILSLSTkMNLKPALLL 504 Ophiostoma mitovirus 1b
Q9ZXZ7 582 QFARAGLLEPGESlLQAILSRNTFSKgrVL--------PGYKTESVTSQKALALgvlallGERFRSGIIPLRTVMHAIID 653 Thanatephorus cucumeris
Q6GYC2 462 DFFKIKRNQYNFS-GDILTMLLKLYQ--GLkiy---kgDKSKKHYYLSLNRFKNldiflfALNNTFGYSTYDHKRSFLIS 535 Gremmeniella abietina...
Q9WJ22 457 TYLQRIPSLN----VDILTCVGKLYG--YLlir---nrIKSPNTIKRSLYDFHH------SIRYSFGLLNYEEIRNYLHN 521 Ophiostoma mitovirus 4
Q3S3F3 429 DYLQRIPSKSNLTsLQLFASCLS-----GIkfg---krVYSKALILKLLRNFNI------SLRYSYGLLTPYELREYILT 494 Thielaviopsis basicol...
Q9WJ23 471 KFHYKYPHLTNVKlTDIMFIIFK-----GLkik---grIITNSQLRFNLMKINF------LLRYINKLVNFDETRLFYTK 536 Ophiostoma mitovirus 5
Q9WJ24 470 SFFVEKGNTFLNK-DTLLVCVSKFIQlhSLtl----kkPIGLNKVKGILYPFNF------MLRYRQNLCTNEEIRIFLGS 538 Ophiostoma mitovirus 6
Q6EH16 314 EILERGLCMWYDVyPQLLSLLPKIYRryFKlcdw-fiaLHLRRREHLGDQDHEIln---pRIAYFNVFLNKEKIISLLEI 389 Cryphonectria cubensi...
Q33339 561 ELLRRGVCELYDLyPQYINKLPKIYLryNLlid--wvvVAFTNQILIGDRPRAD------GIRLFDYFVGLEVIPPLLRI 632 Cryphonectria parasit...
Q18L80 495 TLVGRGGRARGHQ-GTALSSLLEMMRvnLI------------------------------NFSKSQPMTFLNIFFP---- 539 Ophiostoma mitovirus 1a
Q18L79 505 RLFGFGSKSIGHStLPFTRYSLRSSLdhLFisplanssNKWLDYFS--------------CIRHLKSLTLNNSLLRYFLW 570 Ophiostoma mitovirus 1b
Q9ZXZ7 654 PI---------------SKNLDLKGDAIAIPIKASLHAAYQALVEGDKPQLYPFSKEWNREPK---FLENEDKLASR--- 712 Thanatephorus cucumeris
Q6GYC2 536 KE---------------YSKDLPGPKIMQDLIXYVISTGLSNLTVESVNKSLKFVDTIIDNKSl-lNIEDPNDLSNLp-- 597 Gremmeniella abietina...
Q9WJ22 522 KFpfd---------nyyAWPERLVHSKLNEIFKLEMVESAKSFSKDFMNQSTMLINTVTDNEI----------MVQWp-- 580 Ophiostoma mitovirus 4
Q3S3F3 495 GFnmg---------eevLPSDNRILEWFKGIICDGVAGKVSTLSREYTKEVDSLEEHKSSQHIl-nSINIEITYENLqw- 563 Thielaviopsis basicol...
Q9WJ23 537 FIkse---------disMVNEHNFLDFTRGMLKLGLTQKIEN----SVKELKTFYDDVLKNSFi-sNIENKNDLQYEp-- 600 Ophiostoma mitovirus 5
Q9WJ24 539 STckrddymlpisakdvSLELTRVISAALVGMAYNAEKSLKNIYFDLDKLSPWIGDGFKTGKHpk--------------- 603 Ophiostoma mitovirus 6
Q6EH16 390 MWns------------tVRDWFRLWNSIKYTLNKGLFISQARVGLPDWSELIFFPLLPSTYIMimsYATSLNDISKAfgn 457 Cryphonectria cubensi...
Q33339 633 MLht------------iKKDWNGLWNSIKYTLNKGFVVSQVRVGLPDWTELFLLPILPSTYIIirdYCRSFNDLTKLfge 700 Cryphonectria parasit...
Q18L80 540 -----------------SLTESMVKSILIDYLASSGKLKDLSLLLRDGPASYPKEKRTENLGL---------DQVKEsnk 593 Ophiostoma mitovirus 1a
Q18L79 571 GF-----------------------EFLKYKWVYMKVRENEQLMLKHGTHHYHQIVSETLLNY---WCPSPTDEVLKspn 624 Ophiostoma mitovirus 1b
Q9ZXZ7 713 ---LLHSA-LNKVIILRDQYNWFIAEnASEMYFPLSYLN--NSSAKYL 754 Thanatephorus cucumeris
Q6GYC2 598 ---LFKGF-QAYISNLRKTVEGWNNK-SISLIEASRGLV--QMDILPI 638 Gremmeniella abietina mitochondrial RNA virus S2
Q9WJ22 581 ---LYKGF-MNHIEKLKDYIKSKQNQhDIDLLDLMQNLR--FQNLDSI 622 Ophiostoma mitovirus 4
Q3S3F3 564 -spLIIGM-FNHINKVSEKCGEWLYG-DVPLMDIIQQFT--LPSADSL 606 Thielaviopsis basicola mitovirus
Q9WJ23 601 ---LINGL-YNKMLIMRNSIDRIVRNkDFDIIDAMNDMR--LDNPEAY 642 Ophiostoma mitovirus 5
Q9WJ24 604 --vMIQSI-YNSVKSLSDFGLKMAQN-KLTLSAAMDSLL--LVDLDSI 645 Ophiostoma mitovirus 6
Q6EH16 458 wwlLNSL--EKDQINIFDVIAMMEREsILDLDINDKKKV--KLSLDNL 501 Cryphonectria cubensis mitovirus 2c
Q33339 701 wwlLRFES-ESYQVSILDVIDRLAHTsIPNLDIHDKKKV--KLTLDNL 745 Cryphonectria parasitica mitovirus 1-NB631
Q18L80 594 lilANFSQdLKLHKKFFGALDAFMMKtGGNIPQVTKTKL--PIKDKAP 639 Ophiostoma mitovirus 1a
Q18L79 625 iadLSAGF-FFSTPPIDKASFKVLMInHINILFSCGSLFteLMNGGAM 671 Ophiostoma mitovirus 1b
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