Conserved Protein Domain Family
Syntaphilin

?
pfam15290: Syntaphilin (this model, PSSM-Id:405878 is obsolete and has been replaced by 434601)
Golgi-localized syntaxin-1-binding clamp
Syntaphilin or Syntabulin is a family of eukaryotic proteins. Syntaphilin binds to syntaxin-1 thereby inhibiting SNARE complex formation by absorbing free syntaxin-1. So it is a syntaxin-1 clamp that controls SNARE assembly.
Statistics
?
PSSM-Id: 405878
Aligned: 18 rows
Threshold Bit Score: 425.677
Created: 21-May-2020
Updated: 7-Aug-2020
Structure
?
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
?
Format: Row Display: Color Bits: Type Selection:
XP_019220360 166 PAGNPAANRDAelyapyrTPPRAaSS-TNSSSCTSSPTS-RRAGLGRYHSCGDNHGIRPPNPEQYLTPLQQKEVAIRHLK 243 Nile tilapia
XP_016082314 251 NQMSPVNAHPN-------YGPSS-PSsSNSGSYKGSDSSpVLRRAGRYASCGESHGVKPPNPEQYLTPLQQKEVTVRHLK 322 platypus
XP_006921737  62 RTSPPVSVRDA-------YGTSSlSSsSNSGSCKGSDSSpTPRRSMKYTLCSDNHGIKPPTPEQYLTPLQQKEVCIRHLK 134 black flying fox
XP_004177133  14 rrrpsppGRDT-------YGTSSlSSsSNSGSCKGSDSSpTPRRSSKYNLCSDNHGIKPPTPEQYLTPLQQKEVCIRHLK 86  zebra finch
XP_003226156  16 RPSPPVSMRDT-------YGTSSlSSsSNSGSCKGSDSSpTPRRPVKYLLCSDNHGIKPPTPEQYLTPLQQKEVCIRHLR 88  green anole
XP_005158281  58 PAGSPSAPRDAelyapirTPPKT-PSfTNSSSCSNSSSSrRRTAPVRYHSCGDNHGIKPPNPEQYLTPLQQKEVAIRHLK 136 zebrafish
CAF96264     114 PAGTPMANRDAelyapykTAPKAaSS-TNSSSCNSSPTSsRRAGLGSYHLCGDNHGVRPPNPEQYLTPLQQKEVAIRHLR 192 spotted green p...
1_pfamImport   1 PPGSPAANRGAelyapyrTPPRAaSStTNSSSCNSSPTS-RRVNPGRFHSCGDNHGIRPPNPEQYLTPLQQKEVAIRHLK 79 
XP_011471585  58 PPGSPTANRDAdlyaphkTPPRAaLStTNSSSCNSSPTS-RRVSLGRYHSCGENHGIRPPNPEQYLTPLQQKEVAIRHLK 136 Japanese medaka
XP_016287348   5 NQQSPVNVHPN-------YGPSS-PSsSNSGSYKGSDSSpIMRRPGRYMSCGENHGVKPPNPEQYLTPLQQKEVTVRHLK 76  gray short-tail...
XP_019220360 244 TKLLESENRVHDRETEIEELKAQLSRMREDWIEEECHRVEAQLSLKEARKEIKQLRQVVETMKSSLMEKDKGIQKYFIDI 323 Nile tilapia
XP_016082314 323 TKLKESESQLQERETEIAELKSQLTRMRDDWIEEECHRVEAQLALKEARKEIKQLKQVIETMRSSLADKDKGIQKYFVDI 402 platypus
XP_006921737 135 ARLKDTQDRLQDRDTEIDDLKTQLSRMQEDWIEEECHRVEAQLALKEARKEIKQLKQVIDTVKNNLIDKDKGLQKYFVDI 214 black flying fox
XP_004177133  87 ARLKDTQERLQDRDAEIEDLKTQLSRMQEDWIEEECHRVEAQLALKEARKEIKQLKQVIDTVKNNLLEKDKGLQKYFVDI 166 zebra finch
XP_003226156  89 ARLKDTHERLQDRDSEIDDLKTQLSRMQEDWIEEECHRVEAQLALKEARKEIKQLKQVIDTVKNNLIEKDKGLQKYFVDI 168 green anole
XP_005158281 137 TKLRDSENTVCDRESEIEELKSQLGRMREDWIEEECHRVEAQLALKEARKEIKQLRQVVETMKNSLMEKDKGIQKYFIDI 216 zebrafish
CAF96264     193 TKLLESENRVHDREAEIQDLKTQLSRMREDWIEEECHRVEAQLSLKEARKEIKQLRQVVETMKSSLMEKDKGIQKYFIDI 272 spotted green p...
1_pfamImport  80 TKLLESENTVRDRETEVGELKSQLGRMREDWIEEECHRVEAQLSLKEARKEIKQLRQVVETMKSSLMEKDKGIQKYFIDI 159
XP_011471585 137 TKLLESENKVCDRETEIEELKGQLSRMREDWIEEECHRVEAQLSLKEARKEIKQLRQVVETMKSSLMEKDKGIQKYFIDI 216 Japanese medaka
XP_016287348  77 TKLKESESRLQERETEIAELKSQLARMREDWIEEECHRVEAQLALKEARKEIKQLKQVIETMRSSLADKDKGIQKYFVDI 156 gray short-tail...
XP_019220360 324 NIQNRKLESLLQSMELAQSGAnLQDENTLDFMYDSSDGS----------GKKMVgdeegameVGHQ--GAEAMADSGllA 391 Nile tilapia
XP_016082314 403 NIQNTKLESLLQCMEMAQNGC-FREELCLEYLVESPGQSvplspactplARGLA--------LEDQagALEELGETP--A 471 platypus
XP_006921737 215 NIQNKKLETLLHSMEVAQNGT-AKEDGTGESAGGSPARSltrsstytklSDPAVcgdlppgdHPAS--SAEDGADSGfvA 291 black flying fox
XP_004177133 167 NIQTKKLETLLHSMEVAQNGA-PKEEGAGESAGGSPARSltrsstytklSDQGAggrn-vggSQTI--SLDEGADSGfvG 242 zebra finch
XP_003226156 169 NIQNKKLETLLQTMEVAQDGA-GKEEGAAESAGGSPARSltrsstytklSDQGAadrn-iggSQTI--SVDDAADSGfaA 244 green anole
XP_005158281 217 NIQNRKLESLLHSMELAQNGCnLQDEPTLDFICEAPESS----------TEAKMele---lhCGEQ--AVEEMANSEllI 281 zebrafish
CAF96264     273 NIQNRKLESLLRSMELAQSGTnLQDENTLDFLCERPNGG----------GNKLVgeeghgleMGEQ--GVEAMADSGllI 340 spotted green p...
1_pfamImport 160 NIQNRKLESLLQSMELAQSGTsLQDDNTLDCICDGPGPC----------GKKMVgdeeggleLGTQ--GAEAMADSGllA 227
XP_011471585 217 NIQNRKLESLLHSMELAQSGSsLQDENPLDFMCDSSDGS----------GRKMLrmeeggieLGDQ--GAEALADSGllV 284 Japanese medaka
XP_016287348 157 NIQNKKLESLLQSMEMAQNGS-LRDEQCLDYLCDSPEKSlppntaygkmADARA--------LEDQ--TIEEGAESEllA 225 gray short-tail...
XP_019220360 392 NDEMANRADIL--------------EKVFMSTAMDFSQDCSSKlrasaesgpgvSAlsgerqltdsstgtqptlpdMVAI 457 Nile tilapia
XP_016082314 472 PDSLPTGLDLF--------------EEFMTAATTESGEVAVFQ-----------SS--------------------AAPA 506 platypus
XP_006921737 292 NDDTMSRTDALeassllssgvdcgpEEASLHSSFSLGPRFPAS-----------NTyekllcg-------meagvqASCm 353 black flying fox
XP_004177133 243 MEEAPGHTDPL-------------------EVGGEPGTRLPPS-----------NTyekvlglr----ssveagvqASCm 288 zebra finch
XP_003226156 245 ADDSLSRTDFLdqsslissgvdcgtDEISLQTNSTLGSRVPTS-----------STyeklmgsq----qsveaavqVSCm 309 green anole
XP_005158281 282 NDEMVNRVEIL------------------MSTAVDSSQDGSTKiisq----pglSCle-----------------pSVSE 322 zebrafish
CAF96264     341 NDEIASRVDIL--------------EQVFMSTAVDFSQDCKRRadp------gvSTlsedplmi---------geppkpr 391 spotted green p...
1_pfamImport 228 NDEMANRADIL--------------EQVFMSTAVDFkegrlieds----------------------igpppalpnNMA- 270
XP_011471585 285 NDEMANSADIF--------------EQVFMSTAVDFSQDSSNNpgaag--esgaLSeeeqmas------astaplsPKTL 342 Japanese medaka
XP_016287348 226 IENVENSTDLF--------------EEIMMATTTEAGDLSLLH-----------STsisspfk------tkafemgP--V 272 gray short-tail...
XP_019220360 458 SGTLPH--------QDKEVQADIMPMPPDLQALLFQL 486 Nile tilapia
XP_016082314 507 PPDQMApavedsvvMEQVVQLDMAPCGPGIEQPLRKM 543 platypus
XP_006921737 354 --------------QERAIQTDFVQYQPDLDTILEKV 376 black flying fox
XP_004177133 289 --------------QERAIQTDFVPCQPDLDTILEKV 311 zebra finch
XP_003226156 310 --------------QEQAIQTDFVPYQPDLDTIVEKV 332 green anole
XP_005158281 323 KSTKEHvssipigaEDKGIQTDDVIYSTDLQTLLYQL 359 zebrafish
CAF96264     392 SNPISSatsvkqstEDKGMQTDAMPCSPDLSALVLQL 428 spotted green pufferfish
1_pfamImport 271 SITISMsapsqqdtEDKGMQTDMLPVGPDLQAVLFQL 307
XP_011471585 343 FSPSPCqq----ntEDKGIQTELMPVSPDLQALLLQL 375 Japanese medaka
XP_016287348 273 TQEEds------mvTEQAIQTDVVPYSPDVEQLIQNM 303 gray short-tailed opossum
| Disclaimer | Privacy statement | Accessibility |
NCBI Home NCBI Search NCBI SiteMap