5C2M


Conserved Protein Domain Family
Tachylectin

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pfam14517: Tachylectin (this model, PSSM-Id:434008 is obsolete and has been replaced by 464197)
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Tachylectin
This family of lectins binds N-acetylglucosamine and N-acetylgalactosamine and may be involved in innate immunity. It has a five-bladed beta-propeller structure with five carbohydrate-binding sites, one per beta sheet.
Statistics
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PSSM-Id: 434008
Aligned: 7 rows
Threshold Bit Score: 206.144
Created: 27-Apr-2021
Updated: 29-Sep-2021
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
5C2M_A         18 AVSYDGELFKGS--PPESAQASWLT-SATRIGTkgWANFSHLLFNPDGTLYG-VVNDKFYK--GPTPHRTSaEEWI---- 87  starlet sea an...
1_pfamImport    1 VMDEDYTVRVAP--PPQDPTDNFHT-RAITLGR--LEGLDNIALSPTGKLFA-IREGNLYT--GPVSSCVN-QILF---- 67 
XP_015192242   20 GMESSGSAHMGL--PPVDCNEVFHQ-HAKHIGN--LQGFSHILFSPTGIMYA-VRDADIYA--GSPPVNPD-EDWL---- 86  spotted gar
XP_015192351    7 GVESSGFAQMGR--PPVDYNDNFYA-RAKRVGN--LKGFSHILFSPTGIMFA-VRNADIYA--GSPPVNPD-EDWLt--- 74  spotted gar
jgi:Tbis_0296  31 AIDGDGRLKWYGhrDAGGGSWSWASgSGAQIGHg-WHGFKRVFSGGNGVIYA-VDGSGYLKwyRHTGASTGaNTWAs--- 105 Thermobispora ...
CCH30242       91 GVTPSGSVFRYPhnDPENGTFDWGV-KQNGIGSg-WE-VGRTLAGPGGVMYSlVGATGELR--RLRWTENG---WVnfgs 162 Saccharothrix ...
WP_023542119  266 SVTTAGSLLRRDvaDPAGGTATVP--EASTIDSg-WNQYPRVLAGNAATFYG-IKSDGLYI--SHRVSSTG--VWD---- 333 Streptomyces n...
5C2M_A         88 AQATLIGDGgWGAFRF------LFFDPHGVLYGVTEDK----LYKREPPSSDEDHW----LGSANLLGAeGWGDFEFLFF 153 starlet sea an...
1_pfamImport   68 SLDRRIGRGaWDMFKL------FSVDPRGLLCAVGDSGs---LYWGPRPEDESQNWv---GDLGEYVGNyNCSDTDSIVS 135
XP_015192242   87 TKAKCVGRGkWDQFHS------LFFHPEGSLYAVSDDGe---LYKGPPPDNEEVSWl---YKVAKMIGTvGW-LFPSLFF 153 spotted gar
XP_015192351   75 TTAKCVGKGeWDQFHS------LFFHPEGSLYAVTKSGe---FYKGPPPENEYVSWr---YRVATKIGTgGW-LFPSLFF 141 spotted gar
jgi:Tbis_0296 106 GSGKVIGHG-WGGFVD------VVADGTGVIYALDADGnl-rWYRHLSPTTGGTGWa---SGSGTVIRT-GWKAITKLIP 173 Thermobispora ...
CCH30242      163 QQYRVVGSG-WGRYSEaahrnkVTVDEKGRLYEINADGhlevFVWE---GDDATGWwtaeTGGGKVLDT-GWNQYDSITA 237 Saccharothrix ...
WP_023542119  334 IHHRKISTS-FGTYSTaanrdkISVDRGGHIWHVDAEGdl-rWVKY---STATSTWd---AVGNKKIDS-GWGRFSHIVA 404 Streptomyces n...
5C2M_A        154 DPEGKLYG--VVNG--KLHKGDPPKDRHDAWLGSSTLFKGELWGNFRHL--FFTSNGHLCGA---HDSf----YKKSPPI 220 starlet sea an...
1_pfamImport  136 DPQGALYAi-TSDG--RIQMWVRPAETDSDWLDLGTALSQRDGRDSPHVisFCPEGNLWWVS---KADgk--lYKGPQPT 207
XP_015192242  154 DPEGILYAv-TSEG--KLVKGKPPTEMNYDWLNNAETLGSGGWPKLTHFiaFSHDGNLWCVS---KDEgk--mYSAPPPV 225 spotted gar
XP_015192351  142 DPEGILYAv-TSQG--KLVKGRPPSHMNQDWISNAELVGTGGWAELTHFmaFSPDGNLWCVS---KDEgk--iYSAPPPE 213 spotted gar
jgi:Tbis_0296 174 GRDGVIFGi-NTKGlvRWYKHLNPSGGGSTFGTGTGLVTGEEWDRYRTP--SGAGAGVFYAV---DSGgrlwwERHADPQ 247 Thermobispora ...
CCH30242      238 AGDGVLYAr-KPTG--ELYRFRYHAASDR-FTQY-AKPAGVGWNMFNRI--FSPGGDVLYATwlnNNNpemlwYRYDEAT 310 Saccharothrix ...
WP_023542119  405 TDDGVVYGidSATG--HLVRSRFDFESQR-WLQRQVTVSTADWRDSKSItsF--GGDVILRV---KANgevrhYRYHEPT 476 Streptomyces n...
5C2M_A        221 GLD---WLAh---eSNMVGHGg-WHMFKL 242 starlet sea anemone
1_pfamImport  208 QGNpgyWEK-----ATFLGPD--YHRYRL 229
XP_015192242  226 QSSadgWLEk----AQYLGSG--YDRYEM 248 spotted gar
XP_015192351  214 FATd-nWIGr----AQKLGFNynCYQILA 237 spotted gar
jgi:Tbis_0296 248 AGAp-vWYE-----RRQIGSG--WGSFTS 268 Thermobispora bispora DSM 43833
CCH30242      311 DT----WADtgrdvGKLVGHG--WWGELD 333 Saccharothrix espanaensis DSM 44229
WP_023542119  477 ASFsgsY-------NLLIGSGthWAGYTS 498 Streptomyces niveus
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